Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACFWHB_RS17285 | Genome accession | NZ_CP172298 |
| Coordinates | 3796466..3796786 (+) | Length | 106 a.a. |
| NCBI ID | WP_163150075.1 | Uniprot ID | A0AAW9YID0 |
| Organism | Aeromonas sp. A-8 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3791466..3801786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFWHB_RS17260 (ACFWHB_17260) | - | 3792044..3792679 (-) | 636 | WP_234570406.1 | hemolysin III family protein | - |
| ACFWHB_RS17265 (ACFWHB_17265) | - | 3792914..3794446 (+) | 1533 | WP_395948929.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ACFWHB_RS17270 (ACFWHB_17270) | - | 3794583..3795134 (+) | 552 | WP_025325884.1 | septation protein A | - |
| ACFWHB_RS17275 (ACFWHB_17275) | - | 3795159..3795455 (+) | 297 | WP_139745320.1 | YciI family protein | - |
| ACFWHB_RS17280 (ACFWHB_17280) | cysQ | 3795545..3796300 (-) | 756 | WP_395948930.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACFWHB_RS17285 (ACFWHB_17285) | comEA | 3796466..3796786 (+) | 321 | WP_163150075.1 | ComEA family DNA-binding protein | Machinery gene |
| ACFWHB_RS17290 (ACFWHB_17290) | galU | 3796880..3797791 (+) | 912 | WP_106884858.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACFWHB_RS17295 (ACFWHB_17295) | - | 3798005..3799402 (+) | 1398 | WP_106884859.1 | peptide MFS transporter | - |
| ACFWHB_RS17300 (ACFWHB_17300) | - | 3799473..3800444 (-) | 972 | WP_395948931.1 | response regulator | - |
| ACFWHB_RS17305 (ACFWHB_17305) | - | 3800758..3801432 (+) | 675 | WP_042649095.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11130.96 Da Isoelectric Point: 9.0238
>NTDB_id=1066111 ACFWHB_RS17285 WP_163150075.1 3796466..3796786(+) (comEA) [Aeromonas sp. A-8]
MNRKTLIAALLLGCLPLLSQPALAADKPVAKPATTITSTKEAGKINLNTASADELAALKGVGEKKAQAIVDYREKQGKFT
SVDQLEEVSGIGPATLDANRDMIIVK
MNRKTLIAALLLGCLPLLSQPALAADKPVAKPATTITSTKEAGKINLNTASADELAALKGVGEKKAQAIVDYREKQGKFT
SVDQLEEVSGIGPATLDANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=1066111 ACFWHB_RS17285 WP_163150075.1 3796466..3796786(+) (comEA) [Aeromonas sp. A-8]
ATGAACCGAAAAACACTGATCGCCGCCCTGCTGCTGGGTTGCCTGCCCCTGCTGAGCCAGCCTGCGCTCGCCGCCGACAA
GCCGGTCGCCAAGCCCGCTACGACCATCACCAGCACCAAGGAGGCCGGCAAGATCAACCTGAACACCGCCAGTGCCGATG
AACTCGCGGCGCTAAAGGGCGTTGGCGAGAAGAAGGCGCAAGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACC
TCGGTGGATCAGTTGGAAGAGGTTAGCGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
ATGAACCGAAAAACACTGATCGCCGCCCTGCTGCTGGGTTGCCTGCCCCTGCTGAGCCAGCCTGCGCTCGCCGCCGACAA
GCCGGTCGCCAAGCCCGCTACGACCATCACCAGCACCAAGGAGGCCGGCAAGATCAACCTGAACACCGCCAGTGCCGATG
AACTCGCGGCGCTAAAGGGCGTTGGCGAGAAGAAGGCGCAAGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACC
TCGGTGGATCAGTTGGAAGAGGTTAGCGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
45.217 |
100 |
0.491 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.342 |
100 |
0.443 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.898 |
92.453 |
0.415 |
| comEA | Legionella pneumophila str. Paris |
42.857 |
92.453 |
0.396 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.857 |
92.453 |
0.396 |
| comEA | Acinetobacter baylyi ADP1 |
47.059 |
80.189 |
0.377 |
| comEA | Vibrio campbellii strain DS40M4 |
40.206 |
91.509 |
0.368 |