Detailed information NTG0106233

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAA996_RS09785
• Genome accession: NZ_AP028606
• Coordinates: 1896978..1897382 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1891978..1902382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA996_RS09745 (TKY121773_18960)	rnpA	1892392..1892763 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AAA996_RS09750	-	1892780..1892911 (-)	132	WP_000768904.1	hypothetical protein	-
AAA996_RS09755 (TKY121773_18970)	-	1892912..1894102 (-)	1191	WP_000167766.1	acetate kinase	-
AAA996_RS09760 (TKY121773_18980)	comYH	1894153..1895106 (-)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
AAA996_RS09765	-	1895167..1895761 (-)	595	Protein_1898	methyltransferase domain-containing protein	-
AAA996_RS09770 (TKY121773_19010)	comGG/cglG	1895898..1896311 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAA996_RS09775 (TKY121773_19020)	comGF/cglF	1896289..1896750 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAA996_RS09780 (TKY121773_19030)	comGE/cglE	1896713..1897015 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAA996_RS09785 (TKY121773_19040)	comGD/cglD	1896978..1897382 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAA996_RS09790 (TKY121773_19050)	comGC/cglC	1897375..1897701 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
AAA996_RS09795 (TKY121773_19060)	comGB/cglB	1897703..1898719 (-)	1017	WP_078375398.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAA996_RS09800 (TKY121773_19070)	comGA/cglA/cilD	1898667..1899608 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
AAA996_RS09805 (TKY121773_19080)	-	1899684..1900049 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAA996_RS09810 (TKY121773_19090)	-	1900200..1901258 (-)	1059	WP_000649473.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=106233 AAA996_RS09785 WP_000588013.1 1896978..1897382(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep1]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=106233 AAA996_RS09785 WP_000588013.1 1896978..1897382(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep1]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47