Detailed information NTG1060925

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACGTJS_RS09975
• Genome accession: NZ_CP171363
• Coordinates: 2027928..2029121 (-)
• Length: 397 a.a.
• NCBI ID: WP_315042202.1
• Uniprot ID: -
• Organism: Faucicola mancuniensis strain GVCNT2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2022928..2034121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGTJS_RS09970 (ACGTJS_09970)	-	2023183..2027859 (+)	4677	WP_410471945.1	translocation/assembly module TamB domain-containing protein	-
ACGTJS_RS09975 (ACGTJS_09975)	pilU	2027928..2029121 (-)	1194	WP_315042202.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACGTJS_RS09980 (ACGTJS_09980)	-	2029522..2030241 (-)	720	WP_410471946.1	Bax inhibitor-1/YccA family protein	-
ACGTJS_RS09985 (ACGTJS_09985)	recJ	2030521..2032266 (+)	1746	WP_410471947.1	single-stranded-DNA-specific exonuclease RecJ	-
ACGTJS_RS09990 (ACGTJS_09990)	-	2032286..2032954 (-)	669	WP_315042207.1	trimeric intracellular cation channel family protein	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44733.20 Da
• Isoelectric Point: 6.3474

>NTDB_id=1060925 ACGTJS_RS09975 WP_315042202.1 2027928..2029121(-) (pilU) [Faucicola mancuniensis strain GVCNT2]
MVNEESLKHFAEESLHEARNVMFNMLTKVVEIGGSDLFITAEFPPSVKHQGLMKPLSQKTLTSEKTKLFAYSLMNDRQRE
EFEEHLECNFAINVPNVSRFRVNVFQQQLQVGMVIRTIAAEIPNFEKLMLPQKLRDVIMEKRGLVLVVGGTGSGKSTSLA
AMIDYRNENQAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETG
HLCLGTLHANNANQTLDRIINFFPEERKGQLLMDLSSNMKAIISQRLIRTEDGKGRRAAVEIMLNTPLIADIILKGNMHE
LKAIMTKSRELGMQTFDQALFDLYNEGAITYDEAIRNADSANELRLQIKLKSTRGSKDDGSATALSLHEDVAEEKAE

Nucleotide

• Length: 1194 bp

>NTDB_id=1060925 ACGTJS_RS09975 WP_315042202.1 2027928..2029121(-) (pilU) [Faucicola mancuniensis strain GVCNT2]
ATGGTTAATGAAGAATCCTTAAAACACTTTGCAGAAGAATCGCTCCACGAAGCACGCAATGTCATGTTTAATATGCTGAC
AAAAGTCGTGGAAATCGGCGGTTCTGACCTGTTTATCACCGCAGAATTTCCGCCAAGTGTCAAACATCAAGGCTTGATGA
AACCGCTTAGCCAAAAAACTTTAACATCAGAAAAAACCAAACTGTTTGCCTATAGCTTGATGAATGACAGACAGCGTGAA
GAATTTGAAGAACACCTTGAGTGCAACTTTGCGATTAACGTGCCAAATGTCTCTCGCTTTCGTGTCAATGTCTTTCAACA
ACAACTCCAAGTCGGCATGGTGATTCGTACCATCGCAGCAGAAATTCCTAACTTTGAAAAACTTATGCTCCCACAAAAAC
TTCGTGATGTTATTATGGAAAAACGTGGTTTGGTATTGGTGGTTGGCGGTACAGGTTCTGGTAAATCCACGTCTTTGGCG
GCGATGATTGACTACCGCAACGAAAACCAAGCAGGACATATCATCACTGTAGAAGACCCTGTGGAATACGTTCACAAACA
CAAAAAATCCATGATTACCCACCGTGAAGTGGGCGTGGATAGCCACTCTTGGCACAATGCCCTAAAAAACACTTTGCGAC
AAGCCCCTGATGTGATTTTGATTGGGGAAATTCGTGATACTGAAACGATGGAACACGCCATTGCCTTTGCCGAAACAGGG
CATTTGTGCTTAGGTACATTGCACGCCAACAACGCCAACCAAACGCTTGACCGTATCATTAACTTTTTCCCAGAAGAGCG
AAAAGGTCAGCTATTGATGGATTTGTCGTCCAATATGAAAGCGATTATTTCTCAGCGTCTGATTCGTACCGAAGATGGCA
AAGGTCGCCGTGCGGCGGTTGAGATTATGTTAAACACACCGCTCATTGCCGATATTATCCTAAAAGGCAATATGCACGAG
TTAAAGGCGATTATGACAAAATCTCGTGAACTTGGTATGCAGACCTTTGACCAAGCGTTGTTTGACCTGTATAACGAAGG
GGCGATTACTTATGATGAAGCCATTCGTAATGCCGATTCTGCCAACGAATTGCGTTTACAAATCAAGCTAAAAAGCACAC
GCGGCTCAAAAGATGATGGCAGTGCAACGGCATTGTCATTACATGAAGATGTGGCAGAAGAAAAAGCGGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (124-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	58.989	89.673	0.529
pilU	Acinetobacter baylyi ADP1	55.114	88.665	0.489
pilU	Vibrio cholerae strain A1552	52	88.161	0.458
pilT	Acinetobacter nosocomialis M2	43.939	83.123	0.365
pilT	Acinetobacter baumannii D1279779	43.939	83.123	0.365
pilT	Acinetobacter baumannii strain A118	43.939	83.123	0.365
pilT	Acinetobacter baylyi ADP1	43.636	83.123	0.363