Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | ACF3NW_RS12220 | Genome accession | NZ_CP171110 |
| Coordinates | 2398239..2398703 (+) | Length | 154 a.a. |
| NCBI ID | WP_392423405.1 | Uniprot ID | - |
| Organism | Eikenella halliae strain WGS1533 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2393239..2403703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF3NW_RS12195 (ACF3NW_12195) | - | 2393910..2394305 (-) | 396 | WP_392423404.1 | energy transducer TonB | - |
| ACF3NW_RS12200 (ACF3NW_12200) | orn | 2394477..2395064 (-) | 588 | WP_314251897.1 | oligoribonuclease | - |
| ACF3NW_RS12205 (ACF3NW_12205) | - | 2395192..2395830 (+) | 639 | WP_314251895.1 | MBL fold metallo-hydrolase | - |
| ACF3NW_RS12210 (ACF3NW_12210) | - | 2396151..2396588 (+) | 438 | WP_314251893.1 | MliC family protein | - |
| ACF3NW_RS12215 (ACF3NW_12215) | tsaA | 2396910..2397596 (+) | 687 | WP_314251891.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| ACF3NW_RS12220 (ACF3NW_12220) | pilA/pilA1 | 2398239..2398703 (+) | 465 | WP_392423405.1 | pilin | Machinery gene |
| ACF3NW_RS12225 (ACF3NW_12225) | pilA/pilA1 | 2398769..2399218 (+) | 450 | WP_314251887.1 | pilin | Machinery gene |
| ACF3NW_RS12230 (ACF3NW_12230) | tfpZ | 2399255..2399992 (+) | 738 | WP_392423406.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| ACF3NW_RS12235 (ACF3NW_12235) | tehB | 2400216..2401079 (+) | 864 | WP_314251883.1 | tellurite resistance methyltransferase TehB | - |
| ACF3NW_RS12240 (ACF3NW_12240) | - | 2401463..2403334 (+) | 1872 | WP_314251881.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 15866.16 Da Isoelectric Point: 7.7848
>NTDB_id=1060131 ACF3NW_RS12220 WP_392423405.1 2398239..2398703(+) (pilA/pilA1) [Eikenella halliae strain WGS1533]
MLKKVQKGFTLIELMIVIAIIGILAAIALPAYQDYTARAQATEAFKATAGLQTDLGAWRADRGSFPDAATLVAGNVIFDS
AAALDGKYFAPGGVTVTADTGAINVAFDAGANANKTMSITPTVVAATGQISRWTCAPGSGNGIETRRLPTSCQQ
MLKKVQKGFTLIELMIVIAIIGILAAIALPAYQDYTARAQATEAFKATAGLQTDLGAWRADRGSFPDAATLVAGNVIFDS
AAALDGKYFAPGGVTVTADTGAINVAFDAGANANKTMSITPTVVAATGQISRWTCAPGSGNGIETRRLPTSCQQ
Nucleotide
Download Length: 465 bp
>NTDB_id=1060131 ACF3NW_RS12220 WP_392423405.1 2398239..2398703(+) (pilA/pilA1) [Eikenella halliae strain WGS1533]
ATGTTGAAAAAAGTACAAAAAGGTTTCACCCTGATCGAGTTGATGATTGTTATCGCCATTATCGGTATCTTGGCTGCTAT
CGCTCTGCCGGCTTACCAAGACTACACTGCCCGTGCTCAGGCTACTGAAGCTTTCAAAGCTACTGCTGGTCTGCAAACTG
ATTTGGGTGCTTGGCGTGCTGACCGTGGCTCATTCCCGGATGCTGCTACTTTGGTTGCTGGTAACGTAATTTTTGATAGC
GCTGCTGCTTTGGATGGTAAATACTTTGCTCCTGGTGGTGTAACTGTAACTGCTGATACTGGCGCTATTAATGTTGCTTT
TGATGCGGGTGCAAACGCAAATAAAACCATGTCCATTACCCCGACTGTAGTAGCTGCTACTGGTCAGATCTCTCGCTGGA
CTTGTGCTCCTGGTTCTGGTAACGGTATCGAAACTCGCCGTCTGCCAACTAGCTGCCAACAATAA
ATGTTGAAAAAAGTACAAAAAGGTTTCACCCTGATCGAGTTGATGATTGTTATCGCCATTATCGGTATCTTGGCTGCTAT
CGCTCTGCCGGCTTACCAAGACTACACTGCCCGTGCTCAGGCTACTGAAGCTTTCAAAGCTACTGCTGGTCTGCAAACTG
ATTTGGGTGCTTGGCGTGCTGACCGTGGCTCATTCCCGGATGCTGCTACTTTGGTTGCTGGTAACGTAATTTTTGATAGC
GCTGCTGCTTTGGATGGTAAATACTTTGCTCCTGGTGGTGTAACTGTAACTGCTGATACTGGCGCTATTAATGTTGCTTT
TGATGCGGGTGCAAACGCAAATAAAACCATGTCCATTACCCCGACTGTAGTAGCTGCTACTGGTCAGATCTCTCGCTGGA
CTTGTGCTCCTGGTTCTGGTAACGGTATCGAAACTCGCCGTCTGCCAACTAGCTGCCAACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Eikenella corrodens VA1 |
90.85 |
99.351 |
0.903 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.471 |
100 |
0.403 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.49 |
100 |
0.403 |
| pilA2 | Legionella pneumophila str. Paris |
39.216 |
99.351 |
0.39 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
38.961 |
100 |
0.39 |
| pilE | Neisseria gonorrhoeae MS11 |
35.294 |
100 |
0.39 |