Detailed information NTG0106000

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAA985_RS10435
• Genome accession: NZ_AP028603
• Coordinates: 1979456..1979860 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Pne2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1974456..1984860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA985_RS10395 (TKY181970_20270)	rnpA	1974870..1975241 (-)	372	WP_000739244.1	ribonuclease P protein component	-
AAA985_RS10400	-	1975258..1975389 (-)	132	WP_000768904.1	hypothetical protein	-
AAA985_RS10405 (TKY181970_20280)	-	1975390..1976580 (-)	1191	WP_000167752.1	acetate kinase	-
AAA985_RS10410 (TKY181970_20290)	comYH	1976631..1977584 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
AAA985_RS10415	-	1977645..1978239 (-)	595	Protein_2027	methyltransferase domain-containing protein	-
AAA985_RS10420 (TKY181970_20320)	comGG/cglG	1978376..1978789 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAA985_RS10425 (TKY181970_20330)	comGF/cglF	1978767..1979228 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAA985_RS10430 (TKY181970_20340)	comGE/cglE	1979191..1979493 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAA985_RS10435 (TKY181970_20350)	comGD/cglD	1979456..1979860 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAA985_RS10440 (TKY181970_20360)	comGC/cglC	1979853..1980179 (-)	327	WP_050260822.1	comG operon protein ComGC	Machinery gene
AAA985_RS10445 (TKY181970_20370)	comGB/cglB	1980181..1981197 (-)	1017	WP_073177425.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAA985_RS10450 (TKY181970_20380)	comGA/cglA/cilD	1981145..1982086 (-)	942	WP_000249559.1	competence type IV pilus ATPase ComGA	Machinery gene
AAA985_RS10455 (TKY181970_20390)	-	1982162..1982527 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAA985_RS10460 (TKY181970_20400)	-	1982794..1984049 (+)	1256	WP_088804233.1	ISL3 family transposase	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=106000 AAA985_RS10435 WP_000588023.1 1979456..1979860(-) (comGD/cglD) [Streptococcus pneumoniae strain Pne2]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=106000 AAA985_RS10435 WP_000588023.1 1979456..1979860(-) (comGD/cglD) [Streptococcus pneumoniae strain Pne2]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47