Detailed information NTG1055781

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFDHR_RS10055
• Genome accession: NZ_CP170238
• Coordinates: 2042592..2042912 (-)
• Length: 106 a.a.
• NCBI ID: WP_107632995.1
• Uniprot ID: -
• Organism: Staphylococcus hyicus strain SC360
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2037592..2047912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDHR_RS10025 (ACFDHR_10025)	gcvPA	2038200..2039549 (-)	1350	WP_107632991.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACFDHR_RS10030 (ACFDHR_10030)	gcvT	2039561..2040652 (-)	1092	WP_107632992.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFDHR_RS10035 (ACFDHR_10035)	-	2040807..2041337 (-)	531	WP_107632993.1	shikimate kinase	-
ACFDHR_RS10040 (ACFDHR_10040)	-	2041315..2041512 (-)	198	WP_039645590.1	hypothetical protein	-
ACFDHR_RS10045 (ACFDHR_10045)	-	2041496..2041978 (-)	483	WP_039645587.1	competence type IV pilus minor pilin ComGF	-
ACFDHR_RS10050 (ACFDHR_10050)	comGD	2042171..2042602 (-)	432	WP_209260663.1	competence type IV pilus minor pilin ComGD	-
ACFDHR_RS10055 (ACFDHR_10055)	comGC	2042592..2042912 (-)	321	WP_107632995.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFDHR_RS10060 (ACFDHR_10060)	comGB	2042924..2043991 (-)	1068	WP_119635812.1	competence type IV pilus assembly protein ComGB	-
ACFDHR_RS10065 (ACFDHR_10065)	comGA	2043960..2044934 (-)	975	WP_257070565.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFDHR_RS10070 (ACFDHR_10070)	-	2044990..2045613 (-)	624	WP_107632997.1	MBL fold metallo-hydrolase	-
ACFDHR_RS10075 (ACFDHR_10075)	-	2045628..2045939 (-)	312	WP_039645576.1	MTH1187 family thiamine-binding protein	-
ACFDHR_RS10080 (ACFDHR_10080)	-	2045941..2046927 (-)	987	WP_039645573.1	ROK family glucokinase	-
ACFDHR_RS10085 (ACFDHR_10085)	-	2046924..2047127 (-)	204	WP_039645571.1	YqgQ family protein	-

Sequence

Protein

• Length: 106 a.a.
• Molecular weight: 11824.09 Da
• Isoelectric Point: 9.5056

>NTDB_id=1055781 ACFDHR_RS10055 WP_107632995.1 2042592..2042912(-) (comGC) [Staphylococcus hyicus strain SC360]
MLKIINILKNKKGFTLIEMLLVLLIISVLLILIIPNIAKQSDHIQKTGCAAQLKLVDSQIEAYTLKYNRKPTSIDELIQE
GYIKDNQKNCKSGETITIRGGEAVVS

Nucleotide

• Length: 321 bp

>NTDB_id=1055781 ACFDHR_RS10055 WP_107632995.1 2042592..2042912(-) (comGC) [Staphylococcus hyicus strain SC360]
ATGCTTAAGATCATTAATATATTAAAAAACAAAAAAGGGTTTACTTTAATCGAAATGTTATTGGTTTTACTCATCATTAG
TGTTTTATTAATATTAATAATTCCTAATATAGCCAAACAATCTGATCACATTCAAAAGACTGGATGCGCAGCACAACTTA
AACTCGTAGACAGTCAAATTGAAGCTTACACTTTAAAATACAACCGTAAGCCAACATCAATTGATGAGCTAATTCAAGAA
GGATATATTAAAGATAATCAAAAAAACTGTAAAAGTGGGGAAACTATCACAATTCGTGGTGGCGAAGCTGTTGTCTCATA
A

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (9-33)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	68.932	97.17	0.67
comGC	Staphylococcus aureus MW2	68.932	97.17	0.67
comGC	Bacillus subtilis subsp. subtilis str. 168	44.33	91.509	0.406
comGC/cglC	Streptococcus mitis SK321	46.067	83.962	0.387
comGC/cglC	Streptococcus mitis NCTC 12261	46.067	83.962	0.387
comYC	Streptococcus suis isolate S10	52.632	71.698	0.377
comGC/cglC	Streptococcus pneumoniae D39	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae R6	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae TIGR4	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae Rx1	44.944	83.962	0.377