Detailed information NTG1055719

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFDHT_RS07710
• Genome accession: NZ_CP170227
• Coordinates: 1572338..1572658 (+)
• Length: 106 a.a.
• NCBI ID: WP_107632995.1
• Uniprot ID: -
• Organism: Staphylococcus hyicus strain SC368
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1567338..1577658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDHT_RS07680 (ACFDHT_07675)	-	1568123..1568326 (+)	204	WP_039645571.1	YqgQ family protein	-
ACFDHT_RS07685 (ACFDHT_07680)	-	1568323..1569309 (+)	987	WP_039645573.1	ROK family glucokinase	-
ACFDHT_RS07690 (ACFDHT_07685)	-	1569311..1569622 (+)	312	WP_039645576.1	MTH1187 family thiamine-binding protein	-
ACFDHT_RS07695 (ACFDHT_07690)	-	1569637..1570260 (+)	624	WP_107632997.1	MBL fold metallo-hydrolase	-
ACFDHT_RS07700 (ACFDHT_07695)	comGA	1570316..1571290 (+)	975	WP_257070565.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFDHT_RS07705 (ACFDHT_07700)	comGB	1571259..1572326 (+)	1068	WP_119635812.1	competence type IV pilus assembly protein ComGB	-
ACFDHT_RS07710 (ACFDHT_07705)	comGC	1572338..1572658 (+)	321	WP_107632995.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFDHT_RS07715 (ACFDHT_07710)	comGD	1572648..1573079 (+)	432	WP_209260663.1	competence type IV pilus minor pilin ComGD	-
ACFDHT_RS07720 (ACFDHT_07715)	-	1573272..1573754 (+)	483	WP_039645587.1	competence type IV pilus minor pilin ComGF	-
ACFDHT_RS07725 (ACFDHT_07720)	-	1573738..1573935 (+)	198	WP_039645590.1	hypothetical protein	-
ACFDHT_RS07730 (ACFDHT_07725)	-	1573913..1574443 (+)	531	WP_107632993.1	shikimate kinase	-
ACFDHT_RS07735 (ACFDHT_07730)	gcvT	1574598..1575689 (+)	1092	WP_107632992.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFDHT_RS07740 (ACFDHT_07735)	gcvPA	1575701..1577050 (+)	1350	WP_107632991.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 106 a.a.
• Molecular weight: 11824.09 Da
• Isoelectric Point: 9.5056

>NTDB_id=1055719 ACFDHT_RS07710 WP_107632995.1 1572338..1572658(+) (comGC) [Staphylococcus hyicus strain SC368]
MLKIINILKNKKGFTLIEMLLVLLIISVLLILIIPNIAKQSDHIQKTGCAAQLKLVDSQIEAYTLKYNRKPTSIDELIQE
GYIKDNQKNCKSGETITIRGGEAVVS

Nucleotide

• Length: 321 bp

>NTDB_id=1055719 ACFDHT_RS07710 WP_107632995.1 1572338..1572658(+) (comGC) [Staphylococcus hyicus strain SC368]
ATGCTTAAGATCATTAATATATTAAAAAACAAAAAAGGGTTTACTTTAATCGAAATGTTATTGGTTTTACTCATCATTAG
TGTTTTATTAATATTAATAATTCCTAATATAGCCAAACAATCTGATCACATTCAAAAGACTGGATGCGCAGCACAACTTA
AACTCGTAGACAGTCAAATTGAAGCTTACACTTTAAAATACAACCGTAAGCCAACATCAATTGATGAGCTAATTCAAGAA
GGATATATTAAAGATAATCAAAAAAACTGTAAAAGTGGGGAAACTATCACAATTCGTGGTGGCGAAGCTGTTGTCTCATA
A

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (9-33)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	68.932	97.17	0.67
comGC	Staphylococcus aureus MW2	68.932	97.17	0.67
comGC	Bacillus subtilis subsp. subtilis str. 168	44.33	91.509	0.406
comGC/cglC	Streptococcus mitis SK321	46.067	83.962	0.387
comGC/cglC	Streptococcus mitis NCTC 12261	46.067	83.962	0.387
comYC	Streptococcus suis isolate S10	52.632	71.698	0.377
comGC/cglC	Streptococcus pneumoniae D39	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae R6	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae TIGR4	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae Rx1	44.944	83.962	0.377