Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACFDHT_RS07700 | Genome accession | NZ_CP170227 |
| Coordinates | 1570316..1571290 (+) | Length | 324 a.a. |
| NCBI ID | WP_257070565.1 | Uniprot ID | - |
| Organism | Staphylococcus hyicus strain SC368 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1565316..1576290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFDHT_RS07665 (ACFDHT_07660) | rpmG | 1565848..1566012 (+) | 165 | WP_257053265.1 | 50S ribosomal protein L33 | - |
| ACFDHT_RS07670 (ACFDHT_07665) | - | 1566125..1566664 (+) | 540 | WP_119635809.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACFDHT_RS07675 (ACFDHT_07670) | - | 1566682..1568121 (+) | 1440 | WP_305849953.1 | rhomboid family intramembrane serine protease | - |
| ACFDHT_RS07680 (ACFDHT_07675) | - | 1568123..1568326 (+) | 204 | WP_039645571.1 | YqgQ family protein | - |
| ACFDHT_RS07685 (ACFDHT_07680) | - | 1568323..1569309 (+) | 987 | WP_039645573.1 | ROK family glucokinase | - |
| ACFDHT_RS07690 (ACFDHT_07685) | - | 1569311..1569622 (+) | 312 | WP_039645576.1 | MTH1187 family thiamine-binding protein | - |
| ACFDHT_RS07695 (ACFDHT_07690) | - | 1569637..1570260 (+) | 624 | WP_107632997.1 | MBL fold metallo-hydrolase | - |
| ACFDHT_RS07700 (ACFDHT_07695) | comGA | 1570316..1571290 (+) | 975 | WP_257070565.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFDHT_RS07705 (ACFDHT_07700) | comGB | 1571259..1572326 (+) | 1068 | WP_119635812.1 | competence type IV pilus assembly protein ComGB | - |
| ACFDHT_RS07710 (ACFDHT_07705) | comGC | 1572338..1572658 (+) | 321 | WP_107632995.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFDHT_RS07715 (ACFDHT_07710) | comGD | 1572648..1573079 (+) | 432 | WP_209260663.1 | competence type IV pilus minor pilin ComGD | - |
| ACFDHT_RS07720 (ACFDHT_07715) | - | 1573272..1573754 (+) | 483 | WP_039645587.1 | competence type IV pilus minor pilin ComGF | - |
| ACFDHT_RS07725 (ACFDHT_07720) | - | 1573738..1573935 (+) | 198 | WP_039645590.1 | hypothetical protein | - |
| ACFDHT_RS07730 (ACFDHT_07725) | - | 1573913..1574443 (+) | 531 | WP_107632993.1 | shikimate kinase | - |
| ACFDHT_RS07735 (ACFDHT_07730) | gcvT | 1574598..1575689 (+) | 1092 | WP_107632992.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37003.84 Da Isoelectric Point: 7.2046
>NTDB_id=1055718 ACFDHT_RS07700 WP_257070565.1 1570316..1571290(+) (comGA) [Staphylococcus hyicus strain SC368]
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=1055718 ACFDHT_RS07700 WP_257070565.1 1570316..1571290(+) (comGA) [Staphylococcus hyicus strain SC368]
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |