Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABUS09_RS10680 | Genome accession | NZ_CP169839 |
| Coordinates | 2152007..2152468 (+) | Length | 153 a.a. |
| NCBI ID | WP_375581568.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Rp426 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2147007..2157468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS09_RS10660 | - | 2148396..2149283 (+) | 888 | WP_001017322.1 | metal-dependent hydrolase | - |
| ABUS09_RS10665 | - | 2149415..2150005 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| ABUS09_RS10670 | - | 2150027..2151109 (+) | 1083 | WP_001246375.1 | YgcG family protein | - |
| ABUS09_RS10675 | - | 2151103..2151663 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| ABUS09_RS10680 | pilA | 2152007..2152468 (+) | 462 | WP_375581568.1 | pilin | Machinery gene |
| ABUS09_RS10685 | - | 2152710..2154338 (+) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| ABUS09_RS10690 | bfr | 2154379..2154843 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABUS09_RS10695 | - | 2155088..2155282 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABUS09_RS10700 | - | 2155492..2155875 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15463.59 Da Isoelectric Point: 6.1673
>NTDB_id=1053589 ABUS09_RS10680 WP_375581568.1 2152007..2152468(+) (pilA) [Acinetobacter baumannii strain Rp426]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTKFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTKFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=1053589 ABUS09_RS10680 WP_375581568.1 2152007..2152468(+) (pilA) [Acinetobacter baumannii strain Rp426]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAAATTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAAATTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
43.709 |
98.693 |
0.431 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| pilA | Acinetobacter nosocomialis M2 |
44.138 |
94.771 |
0.418 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.958 |
92.81 |
0.399 |