Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABUS35_RS17280 | Genome accession | NZ_CP169828 |
| Coordinates | 3586231..3586692 (-) | Length | 153 a.a. |
| NCBI ID | WP_306712678.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Lv647 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3581231..3591692
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS35_RS17260 | - | 3582824..3583207 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| ABUS35_RS17265 | - | 3583417..3583611 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABUS35_RS17270 | bfr | 3583856..3584320 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABUS35_RS17275 | - | 3584361..3585989 (-) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| ABUS35_RS17280 | pilA | 3586231..3586692 (-) | 462 | WP_306712678.1 | pilin | Machinery gene |
| ABUS35_RS17285 | - | 3587036..3587596 (-) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| ABUS35_RS17290 | - | 3587590..3588672 (-) | 1083 | WP_001246381.1 | YgcG family protein | - |
| ABUS35_RS17295 | - | 3588694..3589284 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| ABUS35_RS17300 | - | 3589415..3590302 (-) | 888 | WP_001017330.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15507.56 Da Isoelectric Point: 4.6320
>NTDB_id=1053456 ABUS35_RS17280 WP_306712678.1 3586231..3586692(-) (pilA) [Acinetobacter baumannii strain Lv647]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTEITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTEITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=1053456 ABUS35_RS17280 WP_306712678.1 3586231..3586692(-) (pilA) [Acinetobacter baumannii strain Lv647]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGAAATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGAAATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
44.371 |
98.693 |
0.438 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
40.127 |
100 |
0.412 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.958 |
92.81 |
0.399 |