Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACCK32_RS11015 | Genome accession | NZ_CP168975 |
| Coordinates | 2178252..2178722 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain CUBIST-8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2148552..2204500 | 2178252..2178722 | within | 0 |
Gene organization within MGE regions
Location: 2148552..2204500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCK32_RS10795 (ACCK32_10795) | scn | 2148552..2148902 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACCK32_RS10800 (ACCK32_10800) | - | 2149587..2150036 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACCK32_RS10805 (ACCK32_10805) | - | 2150131..2150469 (-) | 339 | Protein_2092 | SH3 domain-containing protein | - |
| ACCK32_RS10810 (ACCK32_10810) | sak | 2151116..2151607 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACCK32_RS10815 (ACCK32_10815) | - | 2151798..2152553 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACCK32_RS10820 (ACCK32_10820) | - | 2152565..2152819 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACCK32_RS10825 (ACCK32_10825) | - | 2152871..2152978 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACCK32_RS10830 (ACCK32_10830) | pepG1 | 2153031..2153165 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACCK32_RS10835 (ACCK32_10835) | - | 2153357..2153653 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACCK32_RS10840 (ACCK32_10840) | - | 2153711..2153998 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACCK32_RS10845 (ACCK32_10845) | - | 2154045..2154197 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACCK32_RS10850 (ACCK32_10850) | - | 2154187..2157972 (-) | 3786 | WP_000582165.1 | phage tail spike protein | - |
| ACCK32_RS10855 (ACCK32_10855) | - | 2157988..2159472 (-) | 1485 | WP_000567394.1 | phage tail domain-containing protein | - |
| ACCK32_RS10860 (ACCK32_10860) | - | 2159469..2163998 (-) | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| ACCK32_RS10865 (ACCK32_10865) | gpGT | 2164055..2164192 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACCK32_RS10870 (ACCK32_10870) | gpG | 2164243..2164593 (-) | 351 | WP_001096354.1 | phage tail assembly chaperone G | - |
| ACCK32_RS10875 (ACCK32_10875) | - | 2164643..2164882 (-) | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| ACCK32_RS10880 (ACCK32_10880) | - | 2164909..2165553 (-) | 645 | WP_000260578.1 | major tail protein | - |
| ACCK32_RS10885 (ACCK32_10885) | - | 2165557..2165961 (-) | 405 | WP_000565500.1 | hypothetical protein | - |
| ACCK32_RS10890 (ACCK32_10890) | - | 2165958..2166362 (-) | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| ACCK32_RS10895 (ACCK32_10895) | - | 2166359..2166721 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACCK32_RS10900 (ACCK32_10900) | - | 2166705..2166989 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACCK32_RS10905 (ACCK32_10905) | - | 2166979..2167263 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| ACCK32_RS10910 (ACCK32_10910) | - | 2167283..2168428 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| ACCK32_RS10915 (ACCK32_10915) | - | 2168452..2169189 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| ACCK32_RS10920 (ACCK32_10920) | - | 2169173..2170360 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ACCK32_RS10925 (ACCK32_10925) | - | 2170376..2172037 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ACCK32_RS10930 (ACCK32_10930) | - | 2172034..2172378 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACCK32_RS10935 (ACCK32_10935) | - | 2172508..2172807 (-) | 300 | WP_000988336.1 | HNH endonuclease | - |
| ACCK32_RS10940 (ACCK32_10940) | - | 2173039..2173455 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACCK32_RS10945 (ACCK32_10945) | - | 2173483..2173683 (-) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| ACCK32_RS10950 (ACCK32_10950) | rinB | 2173683..2173832 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACCK32_RS10955 (ACCK32_10955) | - | 2173829..2174215 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| ACCK32_RS10960 (ACCK32_10960) | - | 2174212..2174418 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| ACCK32_RS10965 (ACCK32_10965) | - | 2174415..2174660 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACCK32_RS10970 (ACCK32_10970) | - | 2174697..2175230 (-) | 534 | WP_000181819.1 | dUTP diphosphatase | - |
| ACCK32_RS10975 (ACCK32_10975) | - | 2175223..2175465 (-) | 243 | WP_000700108.1 | hypothetical protein | - |
| ACCK32_RS10980 (ACCK32_10980) | - | 2175455..2175691 (-) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| ACCK32_RS10985 (ACCK32_10985) | - | 2175684..2176055 (-) | 372 | WP_001549172.1 | hypothetical protein | - |
| ACCK32_RS10990 (ACCK32_10990) | - | 2176064..2176306 (-) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| ACCK32_RS10995 (ACCK32_10995) | - | 2176310..2176678 (-) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACCK32_RS11000 (ACCK32_11000) | - | 2176691..2177095 (-) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACCK32_RS11005 (ACCK32_11005) | - | 2177104..2177322 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACCK32_RS11010 (ACCK32_11010) | - | 2177329..2178222 (-) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| ACCK32_RS11015 (ACCK32_11015) | ssbA | 2178252..2178722 (-) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| ACCK32_RS11020 (ACCK32_11020) | - | 2178723..2179340 (-) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| ACCK32_RS11025 (ACCK32_11025) | - | 2179421..2180341 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACCK32_RS11030 (ACCK32_11030) | - | 2180343..2182286 (-) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| ACCK32_RS11035 (ACCK32_11035) | - | 2182295..2182558 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACCK32_RS11040 (ACCK32_11040) | - | 2182567..2182827 (-) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| ACCK32_RS11045 (ACCK32_11045) | - | 2182867..2183127 (-) | 261 | WP_001549178.1 | DUF2482 family protein | - |
| ACCK32_RS11050 (ACCK32_11050) | - | 2183222..2183383 (-) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| ACCK32_RS11055 (ACCK32_11055) | - | 2183380..2183700 (-) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| ACCK32_RS11060 (ACCK32_11060) | - | 2183759..2183989 (+) | 231 | WP_000549548.1 | hypothetical protein | - |
| ACCK32_RS11065 (ACCK32_11065) | - | 2183986..2184162 (-) | 177 | WP_001001356.1 | hypothetical protein | - |
| ACCK32_RS11070 (ACCK32_11070) | - | 2184178..2184930 (-) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| ACCK32_RS11075 (ACCK32_11075) | - | 2184981..2185310 (+) | 330 | WP_000180411.1 | hypothetical protein | - |
| ACCK32_RS11080 (ACCK32_11080) | - | 2185299..2185514 (-) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| ACCK32_RS11085 (ACCK32_11085) | - | 2185530..2185793 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| ACCK32_RS11090 (ACCK32_11090) | - | 2185790..2185963 (-) | 174 | WP_001801500.1 | hypothetical protein | - |
| ACCK32_RS11095 (ACCK32_11095) | - | 2185926..2186639 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ACCK32_RS11100 (ACCK32_11100) | - | 2186655..2187587 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ACCK32_RS11105 (ACCK32_11105) | - | 2187593..2187934 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ACCK32_RS11110 (ACCK32_11110) | - | 2188138..2188320 (+) | 183 | WP_000705246.1 | hypothetical protein | - |
| ACCK32_RS11115 (ACCK32_11115) | - | 2188398..2189111 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACCK32_RS11120 (ACCK32_11120) | - | 2189302..2190339 (+) | 1038 | WP_000857199.1 | site-specific integrase | - |
| ACCK32_RS11125 (ACCK32_11125) | sph | 2190396..2191220 (+) | 825 | Protein_2156 | sphingomyelin phosphodiesterase | - |
| ACCK32_RS11130 (ACCK32_11130) | lukG | 2191458..2192474 (-) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| ACCK32_RS11135 (ACCK32_11135) | lukH | 2192496..2193551 (-) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| ACCK32_RS11140 (ACCK32_11140) | - | 2193986..2195209 (+) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| ACCK32_RS11145 (ACCK32_11145) | - | 2195581..2196426 (-) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| ACCK32_RS11150 (ACCK32_11150) | - | 2196488..2197399 (-) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| ACCK32_RS11155 (ACCK32_11155) | - | 2197560..2198867 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACCK32_RS11160 (ACCK32_11160) | - | 2199720..2200163 (-) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| ACCK32_RS11165 (ACCK32_11165) | - | 2200269..2200705 (-) | 437 | Protein_2164 | hypothetical protein | - |
| ACCK32_RS11170 (ACCK32_11170) | - | 2201023..2201613 (-) | 591 | WP_001293058.1 | terminase small subunit | - |
| ACCK32_RS11175 (ACCK32_11175) | - | 2201610..2201822 (-) | 213 | WP_000128898.1 | LuxR C-terminal-related transcriptional regulator | - |
| ACCK32_RS11180 (ACCK32_11180) | - | 2201883..2202429 (+) | 547 | Protein_2167 | site-specific integrase | - |
| ACCK32_RS11185 (ACCK32_11185) | groL | 2202524..2204140 (-) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| ACCK32_RS11190 (ACCK32_11190) | groES | 2204216..2204500 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=1049108 ACCK32_RS11015 WP_000934753.1 2178252..2178722(-) (ssbA) [Staphylococcus aureus strain CUBIST-8]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1049108 ACCK32_RS11015 WP_000934753.1 2178252..2178722(-) (ssbA) [Staphylococcus aureus strain CUBIST-8]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |