Detailed information NTG1039022

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACCQ23_RS17530
• Genome accession: NZ_CP167230
• Coordinates: 3986951..3987364 (-)
• Length: 137 a.a.
• NCBI ID: WP_372177100.1
• Uniprot ID: -
• Organism: Xanthomonas axonopodis pv. phyllanthi strain NCPPB 2066
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3981951..3992364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCQ23_RS17520 (ACCQ23_17520)	pilR	3983497..3984951 (+)	1455	WP_372177098.1	sigma-54-dependent transcriptional regulator	Regulator
ACCQ23_RS17525 (ACCQ23_17525)	pilB	3985173..3986909 (-)	1737	WP_372177099.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACCQ23_RS17530 (ACCQ23_17530)	pilA	3986951..3987364 (-)	414	WP_372177100.1	pilin	Machinery gene
ACCQ23_RS17535 (ACCQ23_17535)	comP	3987461..3987889 (-)	429	WP_005921364.1	pilin	Machinery gene
ACCQ23_RS17540 (ACCQ23_17540)	pilC	3988237..3989496 (+)	1260	WP_372177101.1	type II secretion system F family protein	Machinery gene
ACCQ23_RS17545 (ACCQ23_17545)	-	3989503..3990366 (+)	864	WP_184419734.1	A24 family peptidase	-
ACCQ23_RS17550 (ACCQ23_17550)	coaE	3990380..3990991 (+)	612	WP_184419733.1	dephospho-CoA kinase	-

Sequence

Protein

• Length: 137 a.a.
• Molecular weight: 14137.20 Da
• Isoelectric Point: 7.6332

>NTDB_id=1039022 ACCQ23_RS17530 WP_372177100.1 3986951..3987364(-) (pilA) [Xanthomonas axonopodis pv. phyllanthi strain NCPPB 2066]
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVSEAIILADSAKAAVTQNVNNENALTTAACAGVSELSSPTKN
VASFTCQGAGVLTVVTTSVAGSVTLSLVPSYNSDRPVIWTCRHVSGSASYAPSDCRN

Nucleotide

• Length: 414 bp

>NTDB_id=1039022 ACCQ23_RS17530 WP_372177100.1 3986951..3987364(-) (pilA) [Xanthomonas axonopodis pv. phyllanthi strain NCPPB 2066]
ATGAGCCGGGTAAACGGTTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCACTAGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGTCCGAAGCTATTATTTTGGCTGACTCTGCAAAAGCTGCGGTGA
CGCAGAATGTCAATAATGAAAACGCTTTGACTACTGCTGCGTGTGCGGGGGTAAGCGAGCTTTCGTCTCCCACTAAAAAT
GTAGCGTCTTTCACATGTCAGGGCGCAGGAGTGCTGACTGTCGTTACGACCAGCGTTGCAGGCTCGGTAACTCTCTCACT
TGTACCCAGCTACAACTCAGATCGCCCGGTAATCTGGACTTGCCGGCATGTTTCTGGATCGGCTAGCTATGCGCCTTCAG
ATTGCCGAAATTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Pilin (bacterial filament) (Pilin) (36-136)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Ralstonia pseudosolanacearum GMI1000	41.875	100	0.489
pilA2	Legionella pneumophila str. Paris	48.529	99.27	0.482
pilA2	Legionella pneumophila strain ERS1305867	47.794	99.27	0.474
comP	Acinetobacter baylyi ADP1	42.282	100	0.46