Detailed information NTG1038310

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACB088_RS17820
• Genome accession: NZ_CP167121
• Coordinates: 3765141..3767294 (+)
• Length: 717 a.a.
• NCBI ID: WP_375037606.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3760141..3772294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS17800 (ACB088_17800)	pilM	3762092..3763150 (+)	1059	WP_199989399.1	pilus assembly protein PilM	Machinery gene
ACB088_RS17805 (ACB088_17805)	pilN	3763150..3763791 (+)	642	WP_017390950.1	PilN domain-containing protein	Machinery gene
ACB088_RS17810 (ACB088_17810)	pilO	3763788..3764540 (+)	753	WP_375037605.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACB088_RS17815 (ACB088_17815)	pilP	3764551..3765078 (+)	528	WP_045433419.1	pilus assembly protein PilP	Machinery gene
ACB088_RS17820 (ACB088_17820)	pilQ	3765141..3767294 (+)	2154	WP_375037606.1	type IV pilus secretin PilQ	Machinery gene
ACB088_RS17825 (ACB088_17825)	aroK	3767306..3767875 (+)	570	WP_003653807.1	shikimate kinase AroK	-
ACB088_RS17830 (ACB088_17830)	aroB	3767904..3768986 (+)	1083	WP_003653806.1	3-dehydroquinate synthase	-
ACB088_RS17835 (ACB088_17835)	-	3769003..3769884 (+)	882	WP_375037607.1	hypothetical protein	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 77706.87 Da
• Isoelectric Point: 5.4826

>NTDB_id=1038310 ACB088_RS17820 WP_375037606.1 3765141..3767294(+) (pilQ) [Acinetobacter sp. RW6]
MNHVFRQFSMGAVTIAVMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFNKAQQTLTQSKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINSAQAAIKPLSTNTMQPQGVSNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVRTLGSKIPTHLAKRLNVNDFATPVSTIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWVAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYARAQDIMSLVTKGSNNNNGMQSTSGDGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGVNSNNSLLVGGSDTTLWNLREPDDEGKYTIERPDNLNVDLGVTSAGASSIAFSLISMSDFMLDLELSALQADGYGEV
ISTPKVMTADKQRARVATGQQVPYQTTTNSAAGSTATTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVADSAPNGELI
LNKNQINTNVLVNNGETVILGGVFEQATSNSQTKVPFFGDLPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRNH

Nucleotide

• Length: 2154 bp

>NTDB_id=1038310 ACB088_RS17820 WP_375037606.1 3765141..3767294(+) (pilQ) [Acinetobacter sp. RW6]
ATGAATCACGTATTCCGTCAGTTTTCTATGGGGGCTGTAACCATTGCAGTTATGCAAGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACACAAATTGCAGGTCAGGGTACAGAAATTAGAGTTATGTTTAATGGTTTGCCGCCACAACCAC
AGGCATATCAACTTGAAAATCCTTCACGTTTGATTTTGGATTTTAATAAAGCTCAGCAGACTTTAACACAGTCAAAAGTG
GCAATTGGTACAAATGAAGCGAGCTCGGTCGATGTAAGTTCTGACGATCAGCGCTCACGTTTAACTGTAAATTTAAAAGA
GGCGGGTGCATTTACAACGCGCATAGAAGGCAATACTTTTATTTTAAAGATTAATTCAGCTCAAGCAGCTATTAAACCTT
TATCAACAAATACAATGCAACCCCAAGGCGTTTCAAATATTGGCTTTCAGCGTGGTGGTCAAGGTGAAGGGTTAATTGTT
ATTGATTTATTGGGAAGTAATACTCCTGTTGATGTTCAACAACAAGGCAGCAAAGTCGTAGTGAGGACATTGGGTTCTAA
AATTCCCACTCATTTAGCTAAACGTTTAAATGTGAACGATTTTGCGACCCCTGTTTCTACCATCGAATCTTATAACGAAA
AAGGCAATGGCGTTATTACGATCCAATCTACTGGTAGCTATGAATATATGGCCTATCAAGCGGAAAATAAACTCACCATT
AGCTTAAAGCGTCCACAAGACAAAAACGTAACTTCTTTATATAAGACGCCTAATTACTCTGGTAATAAGCTTTCTCTTGA
TTTTCAAGATATTGAAGTTCGTAGGGTTCTACAGTTACTTGCCGATTTTACGGGCATTAATATGGTGGCCGCAGATAGTG
TTCAGGGTAATATTACTTTGCGCTTGAAAGATGTTCCGTGGGATCAGGCACTTGATATTATTTTAAAAACTAAAAATCTG
GATAAACGTAGAAATGGTAATGTCATTTGGGTTGCGCCTGTTGCAGAGTTGATTAAGGCTGAAGAAGAAGAAGCAAAAGC
TGTGGCACAGAGTGTCAAACTGGCTCCATTGCAAACTGAGTATATTCAACTTAAATATGCGCGAGCTCAAGATATCATGA
GCTTAGTAACAAAAGGTTCAAACAATAATAATGGTATGCAAAGCACTTCTGGTGATGGAACTTCAACCTCAACCAATTTA
AATACTGGGGTTGATAGTTTAGGTAATAACGTTGGGAGTTTGTTGAGTCCACGTGGAACAATTACTCAAGATGATCGAAC
CAATACCTTAATTATTAATGATACAGCACAGTCGATTGATCAAATTCGTAAAATGATTGATTTGTTGGATGTGCAAGTCA
AACAGGTCATGGTTGAAGCGCGAATTGTAAGAGCATCTACTTCATTCACCAAAGAGCTTGGGGTTAAGTGGGGAATATTA
TCACAAGGGGTGAACAGTAATAACAGTTTGTTGGTGGGGGGGAGTGATACGACGCTTTGGAATTTAAGAGAACCAGATGA
TGAAGGTAAATACACGATTGAACGGCCAGATAATTTAAACGTTGATTTGGGTGTTACCTCAGCCGGAGCCAGTAGCATAG
CTTTTAGCTTAATTAGTATGTCTGATTTTATGCTGGATTTAGAGTTATCAGCATTGCAGGCAGATGGTTATGGTGAAGTG
ATTTCAACACCAAAAGTCATGACTGCAGATAAACAAAGAGCTAGAGTGGCAACAGGTCAGCAAGTTCCATATCAAACTAC
AACTAATTCTGCTGCCGGCTCAACTGCCACAACTTCTTTTAAAGATGCGCTGTTAAGTTTGGATGTTACGCCAAGTATTA
CACCTGATGGTAAAATTCAAATGAAATTGGATATTTCAAAAGACTCGGTTGCCGATAGTGCGCCTAATGGTGAGTTAATT
TTGAATAAAAATCAGATTAATACCAATGTATTGGTGAATAATGGGGAAACCGTTATTTTGGGTGGAGTATTTGAACAGGC
AACTTCTAATTCACAAACCAAAGTTCCTTTCTTTGGAGACCTCCCTGTAGTTGGCCGTTTATTTAGAAAAGATGTGAAAT
CTGATGATAAACAAGAGCTACTGATTTTCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II and III secretion system protein (Secretin) (551-709)

• AMIN domain (AMIN) (39-118)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	89.612	100	0.902
pilQ	Acinetobacter baumannii strain A118	89.474	100	0.901
comQ	Acinetobacter baylyi ADP1	74.791	100	0.749
pilQ	Pseudomonas aeruginosa PAK	39.888	100	0.399