Detailed information NTG1038306

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACB088_RS17800
• Genome accession: NZ_CP167121
• Coordinates: 3762092..3763150 (+)
• Length: 352 a.a.
• NCBI ID: WP_199989399.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3757092..3768150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS17785 (ACB088_17785)	-	3758156..3758488 (+)	333	WP_003653820.1	hypothetical protein	-
ACB088_RS17790 (ACB088_17790)	-	3758491..3759315 (+)	825	WP_375037604.1	putative RNA methyltransferase	-
ACB088_RS17795 (ACB088_17795)	ponA	3759369..3761930 (-)	2562	WP_133747411.1	penicillin-binding protein PBP1a	-
ACB088_RS17800 (ACB088_17800)	pilM	3762092..3763150 (+)	1059	WP_199989399.1	pilus assembly protein PilM	Machinery gene
ACB088_RS17805 (ACB088_17805)	pilN	3763150..3763791 (+)	642	WP_017390950.1	PilN domain-containing protein	Machinery gene
ACB088_RS17810 (ACB088_17810)	pilO	3763788..3764540 (+)	753	WP_375037605.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACB088_RS17815 (ACB088_17815)	pilP	3764551..3765078 (+)	528	WP_045433419.1	pilus assembly protein PilP	Machinery gene
ACB088_RS17820 (ACB088_17820)	pilQ	3765141..3767294 (+)	2154	WP_375037606.1	type IV pilus secretin PilQ	Machinery gene
ACB088_RS17825 (ACB088_17825)	aroK	3767306..3767875 (+)	570	WP_003653807.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39034.64 Da
• Isoelectric Point: 4.4177

>NTDB_id=1038306 ACB088_RS17800 WP_199989399.1 3762092..3763150(+) (pilM) [Acinetobacter sp. RW6]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQSGKIIYTREQVFGGKQLTLEIQSRYGLSLDE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1038306 ACB088_RS17800 WP_199989399.1 3762092..3763150(+) (pilM) [Acinetobacter sp. RW6]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAATGATGATGAACGAGAAGTTCAGAT
TCGATTAGATGCGGAGCAGTATATACCGTTCCCTTTGGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CTAATCCAAACCGTGTGAATGTACTTTTAGTTGCAACAAGAACAGAAAATGTTGAAACACGAGTAGAAGTACTGGAACTG
GTGGACTTAACTCCTAAGCTTGCTGATGTAGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTGCC
AATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACCACATTATCGGTTATGCAAAGTGGCAAGATCA
TTTATACCCGTGAACAAGTTTTTGGTGGCAAACAGCTGACTTTGGAAATTCAAAGTCGTTATGGCCTGTCTTTAGATGAG
GCGGGACGAGCAAAAAAAGAGCGCTCTTTACCAGATGATTATGACATCGAAATCTTAGAGCCATTTCTTGATGCTGTAGT
GCAACAAGCAGCCCGATCTCTACAATTTTTCTTCTCTTCATCACAATTCAATGAAATTGACCATATTTTACTCGCTGGTG
GGAATGCCAATATTCCTGGGCTTGCTAAATTGTTGCAGCAAAAACTTGGTTACCGTGTGACCATTGCCAATCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCGTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418