Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ACB340_RS01450 Genome accession   NZ_CP167005
Coordinates   271903..272454 (+) Length   183 a.a.
NCBI ID   WP_115224533.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 27     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 266903..277454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB340_RS01450 (ACB340_01450) comX/sigX/comX2/sigX2 271903..272454 (+) 552 WP_115224533.1 sigma-70 family RNA polymerase sigma factor Regulator
  ACB340_RS01455 (ACB340_01455) - 273013..273540 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ACB340_RS01460 (ACB340_01460) yqeH 273540..274658 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  ACB340_RS01465 (ACB340_01465) yhbY 274683..274991 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ACB340_RS01470 (ACB340_01470) - 275060..275692 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  ACB340_RS01475 (ACB340_01475) yqeK 275689..276282 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACB340_RS01480 (ACB340_01480) rsfS 276306..276659 (+) 354 WP_011017339.1 ribosome silencing factor -
  ACB340_RS01485 (ACB340_01485) - 276707..277450 (+) 744 WP_014407307.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22215.98 Da        Isoelectric Point: 9.8369

>NTDB_id=1037083 ACB340_RS01450 WP_115224533.1 271903..272454(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 27]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEETGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
CFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1037083 ACB340_RS01450 WP_115224533.1 271903..272454(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 27]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGACAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
TGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.