Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QUF19_RS04610 | Genome accession | NZ_AP028067 |
| Coordinates | 1023573..1023872 (+) | Length | 99 a.a. |
| NCBI ID | WP_102351290.1 | Uniprot ID | - |
| Organism | Vibrio sp. FE10 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1018573..1028872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUF19_RS04595 | - | 1020953..1021225 (+) | 273 | WP_004736083.1 | HU family DNA-binding protein | - |
| QUF19_RS04600 | ppiD | 1021446..1023311 (+) | 1866 | WP_286296678.1 | peptidylprolyl isomerase | - |
| QUF19_RS04605 | - | 1023382..1023543 (+) | 162 | WP_286296680.1 | hypothetical protein | - |
| QUF19_RS04610 | comEA | 1023573..1023872 (+) | 300 | WP_102351290.1 | ComEA family DNA-binding protein | Machinery gene |
| QUF19_RS04615 | rrtA | 1023863..1024411 (-) | 549 | WP_286296692.1 | rhombosortase | - |
| QUF19_RS04620 | - | 1024421..1025020 (+) | 600 | WP_286296697.1 | DTW domain-containing protein | - |
| QUF19_RS04625 | - | 1025053..1026396 (-) | 1344 | WP_286296698.1 | anti-phage deoxyguanosine triphosphatase | - |
| QUF19_RS04630 | yfbR | 1026452..1027036 (-) | 585 | WP_286296700.1 | 5'-deoxynucleotidase | - |
| QUF19_RS04635 | - | 1027208..1028440 (-) | 1233 | WP_286296702.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10750.25 Da Isoelectric Point: 4.4944
>NTDB_id=103510 QUF19_RS04610 WP_102351290.1 1023573..1023872(+) (comEA) [Vibrio sp. FE10]
MRAIYSTLLLSFLITLSSAVFADSPTKAELYDGIEITVNINTATAEELSALLVGVGDKKAKEIVDYREKNGEFATADSLV
NVKGIGEATVEKNRERIQL
MRAIYSTLLLSFLITLSSAVFADSPTKAELYDGIEITVNINTATAEELSALLVGVGDKKAKEIVDYREKNGEFATADSLV
NVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=103510 QUF19_RS04610 WP_102351290.1 1023573..1023872(+) (comEA) [Vibrio sp. FE10]
ATGCGCGCGATATATTCAACACTACTTCTCTCATTTCTTATTACCCTGAGCTCTGCAGTGTTTGCTGATAGCCCAACTAA
AGCTGAGCTATATGATGGCATTGAGATCACGGTAAACATCAACACAGCGACAGCAGAAGAGCTATCAGCCCTATTAGTGG
GCGTGGGCGATAAGAAAGCAAAAGAGATTGTTGATTACAGAGAGAAGAACGGTGAGTTTGCTACTGCAGATAGTTTGGTG
AACGTGAAAGGAATTGGTGAGGCCACGGTCGAAAAGAACCGCGAAAGAATTCAGCTTTGA
ATGCGCGCGATATATTCAACACTACTTCTCTCATTTCTTATTACCCTGAGCTCTGCAGTGTTTGCTGATAGCCCAACTAA
AGCTGAGCTATATGATGGCATTGAGATCACGGTAAACATCAACACAGCGACAGCAGAAGAGCTATCAGCCCTATTAGTGG
GCGTGGGCGATAAGAAAGCAAAAGAGATTGTTGATTACAGAGAGAAGAACGGTGAGTTTGCTACTGCAGATAGTTTGGTG
AACGTGAAAGGAATTGGTGAGGCCACGGTCGAAAAGAACCGCGAAAGAATTCAGCTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
56.383 |
94.949 |
0.535 |
| comEA | Vibrio cholerae C6706 |
54.167 |
96.97 |
0.525 |
| comEA | Vibrio cholerae strain A1552 |
54.167 |
96.97 |
0.525 |
| comEA | Vibrio campbellii strain DS40M4 |
54.348 |
92.929 |
0.505 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
38.739 |
100 |
0.434 |
| comEA | Acinetobacter baylyi ADP1 |
48.78 |
82.828 |
0.404 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.667 |
60.606 |
0.374 |
| comEA | Legionella pneumophila str. Paris |
35.294 |
100 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
35.294 |
100 |
0.364 |