Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | SD311_RS05805 | Genome accession | NZ_CP166245 |
| Coordinates | 1230062..1230208 (+) | Length | 48 a.a. |
| NCBI ID | WP_318754858.1 | Uniprot ID | - |
| Organism | Staphylococcus sp. KG4-3 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1225062..1235208
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SD311_RS05780 (SD311_005780) | ylqF | 1225250..1226110 (+) | 861 | WP_107551586.1 | ribosome biogenesis GTPase YlqF | - |
| SD311_RS05785 (SD311_005785) | - | 1226117..1226887 (+) | 771 | WP_017724281.1 | ribonuclease HII | - |
| SD311_RS05790 (SD311_005790) | sucC | 1226995..1228161 (+) | 1167 | WP_017724282.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| SD311_RS05795 (SD311_005795) | sucD | 1228183..1229088 (+) | 906 | WP_017724283.1 | succinate--CoA ligase subunit alpha | - |
| SD311_RS05800 (SD311_005800) | - | 1229338..1230045 (+) | 708 | WP_318754857.1 | DNA-processing protein DprA | - |
| SD311_RS05805 (SD311_005805) | dprA | 1230062..1230208 (+) | 147 | WP_318754858.1 | hypothetical protein | Machinery gene |
| SD311_RS05810 (SD311_005810) | topA | 1230413..1232479 (+) | 2067 | WP_017724285.1 | type I DNA topoisomerase | - |
| SD311_RS05815 (SD311_005815) | trmFO | 1232622..1233929 (+) | 1308 | WP_107551589.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| SD311_RS05820 (SD311_005820) | xerC | 1234048..1234938 (+) | 891 | WP_107551590.1 | tyrosine recombinase XerC | - |
Sequence
Protein
Download Length: 48 a.a. Molecular weight: 5289.05 Da Isoelectric Point: 3.9644
>NTDB_id=1033949 SD311_RS05805 WP_318754858.1 1230062..1230208(+) (dprA) [Staphylococcus sp. KG4-3]
MDCALEQNREIYVLPGSIYNPMVQGNLVSAQEGAKIVVKACDILEDYS
MDCALEQNREIYVLPGSIYNPMVQGNLVSAQEGAKIVVKACDILEDYS
Nucleotide
Download Length: 147 bp
>NTDB_id=1033949 SD311_RS05805 WP_318754858.1 1230062..1230208(+) (dprA) [Staphylococcus sp. KG4-3]
ATGGATTGTGCATTGGAACAAAATAGGGAAATATATGTATTACCGGGATCTATATACAATCCTATGGTTCAAGGAAATTT
AGTTAGTGCACAAGAAGGAGCTAAGATTGTTGTGAAGGCTTGTGATATTTTAGAAGATTACAGTTAG
ATGGATTGTGCATTGGAACAAAATAGGGAAATATATGTATTACCGGGATCTATATACAATCCTATGGTTCAAGGAAATTT
AGTTAGTGCACAAGAAGGAGCTAAGATTGTTGTGAAGGCTTGTGATATTTTAGAAGATTACAGTTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Staphylococcus aureus MW2 |
65.957 |
97.917 |
0.646 |
| dprA | Staphylococcus aureus N315 |
65.957 |
97.917 |
0.646 |
| dprA | Haemophilus influenzae Rd KW20 |
50 |
87.5 |
0.438 |
| dprA | Lactococcus lactis subsp. cremoris KW2 |
45.455 |
91.667 |
0.417 |
| dprA | Legionella pneumophila strain ERS1305867 |
46.512 |
89.583 |
0.417 |
| dprA | Glaesserella parasuis strain SC1401 |
47.619 |
87.5 |
0.417 |
| dprA | Bacillus subtilis subsp. subtilis str. 168 |
44.186 |
89.583 |
0.396 |
| dprA | Neisseria meningitidis strain C311 |
41.86 |
89.583 |
0.375 |
| dprA | Neisseria meningitidis MC58 |
41.86 |
89.583 |
0.375 |