Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB6L51_RS07235 Genome accession   NZ_CP163562
Coordinates   1404170..1404751 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BC255T1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399170..1409751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS07210 (AB6L51_07215) - 1399834..1401012 (+) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -
  AB6L51_RS07215 (AB6L51_07220) - 1401063..1401305 (+) 243 WP_003211408.1 YkuS family protein -
  AB6L51_RS07220 (AB6L51_07225) - 1401330..1402139 (-) 810 WP_224559788.1 mechanosensitive ion channel family protein -
  AB6L51_RS07225 (AB6L51_07230) ahpA 1402411..1402953 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  AB6L51_RS07230 (AB6L51_07235) - 1403230..1403688 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  AB6L51_RS07235 (AB6L51_07240) rok 1404170..1404751 (+) 582 WP_007498648.1 hypothetical protein Regulator
  AB6L51_RS07240 (AB6L51_07245) - 1404814..1405731 (-) 918 WP_008345172.1 hypothetical protein -
  AB6L51_RS07245 (AB6L51_07250) - 1405815..1406396 (+) 582 WP_041092412.1 molybdenum cofactor guanylyltransferase -
  AB6L51_RS07250 (AB6L51_07255) - 1406426..1407442 (+) 1017 WP_181891556.1 thiazole biosynthesis adenylyltransferase ThiF -
  AB6L51_RS07255 (AB6L51_07260) glp 1407452..1408726 (+) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  AB6L51_RS07260 (AB6L51_07265) mobB 1408708..1409235 (+) 528 WP_181891557.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AB6L51_RS07265 (AB6L51_07270) - 1409228..1409719 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1030664 AB6L51_RS07235 WP_007498648.1 1404170..1404751(+) (rok) [Bacillus altitudinis strain BC255T1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1030664 AB6L51_RS07235 WP_007498648.1 1404170..1404751(+) (rok) [Bacillus altitudinis strain BC255T1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment