Detailed information NTG1028051

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AB4922_RS16365
• Genome accession: NZ_CP162911
• Coordinates: 3158805..3159491 (-)
• Length: 228 a.a.
• NCBI ID: WP_368774675.1
• Uniprot ID: -
• Organism: Bacillus aerius strain KW1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3153805..3164491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4922_RS16330 (AB4922_16330)	fliW	3153941..3154375 (-)	435	WP_007499985.1	flagellar assembly protein FliW	-
AB4922_RS16335 (AB4922_16335)	-	3154404..3154982 (-)	579	WP_039963694.1	DUF6470 family protein	-
AB4922_RS16340 (AB4922_16340)	flgL	3155029..3155940 (-)	912	WP_039169789.1	flagellar hook-associated protein FlgL	-
AB4922_RS16345 (AB4922_16345)	flgK	3155949..3157469 (-)	1521	WP_368774673.1	flagellar hook-associated protein FlgK	-
AB4922_RS16350 (AB4922_16350)	-	3157485..3157967 (-)	483	WP_368774674.1	flagellar protein FlgN	-
AB4922_RS16355 (AB4922_16355)	flgM	3157986..3158249 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AB4922_RS16360 (AB4922_16360)	-	3158329..3158748 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AB4922_RS16365 (AB4922_16365)	comFC	3158805..3159491 (-)	687	WP_368774675.1	ComF family protein	Machinery gene
AB4922_RS16370 (AB4922_16370)	-	3159488..3159781 (-)	294	WP_368774676.1	late competence development ComFB family protein	-
AB4922_RS16375 (AB4922_16375)	comFA	3159846..3160973 (-)	1128	WP_368774677.1	DEAD/DEAH box helicase	Machinery gene
AB4922_RS16380 (AB4922_16380)	-	3161345..3162187 (-)	843	WP_060832692.1	DegV family protein	-
AB4922_RS16385 (AB4922_16385)	degU	3162399..3163088 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB4922_RS16390 (AB4922_16390)	degS	3163153..3164328 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26161.66 Da
• Isoelectric Point: 10.1478

>NTDB_id=1028051 AB4922_RS16365 WP_368774675.1 3158805..3159491(-) (comFC) [Bacillus aerius strain KW1]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRWDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDSGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=1028051 AB4922_RS16365 WP_368774675.1 3158805..3159491(-) (comFC) [Bacillus aerius strain KW1]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGAATAAACGATGGGATTTTGCTGAGATTCTTGTGATGAATCGATCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACTCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	37.991	100	0.382
comFC/cflB	Streptococcus mitis NCTC 12261	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae R6	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae TIGR4	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae Rx1	36.681	100	0.368
comFC/cflB	Streptococcus pneumoniae D39	36.681	100	0.368