Detailed information NTG1028054

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB4922_RS16390
• Genome accession: NZ_CP162911
• Coordinates: 3163153..3164328 (-)
• Length: 391 a.a.
• NCBI ID: WP_035389673.1
• Uniprot ID: A0AB39J225
• Organism: Bacillus aerius strain KW1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3158153..3169328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4922_RS16360 (AB4922_16360)	-	3158329..3158748 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AB4922_RS16365 (AB4922_16365)	comFC	3158805..3159491 (-)	687	WP_368774675.1	ComF family protein	Machinery gene
AB4922_RS16370 (AB4922_16370)	-	3159488..3159781 (-)	294	WP_368774676.1	late competence development ComFB family protein	-
AB4922_RS16375 (AB4922_16375)	comFA	3159846..3160973 (-)	1128	WP_368774677.1	DEAD/DEAH box helicase	Machinery gene
AB4922_RS16380 (AB4922_16380)	-	3161345..3162187 (-)	843	WP_060832692.1	DegV family protein	-
AB4922_RS16385 (AB4922_16385)	degU	3162399..3163088 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB4922_RS16390 (AB4922_16390)	degS	3163153..3164328 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator
AB4922_RS16395 (AB4922_16395)	-	3164550..3165218 (+)	669	WP_017357860.1	YigZ family protein	-
AB4922_RS16400 (AB4922_16400)	-	3165203..3166294 (+)	1092	WP_135226381.1	LCP family protein	-
AB4922_RS16405 (AB4922_16405)	-	3166331..3167398 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
AB4922_RS16410 (AB4922_16410)	-	3167533..3168780 (-)	1248	WP_368774678.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45509.22 Da
• Isoelectric Point: 5.8757

>NTDB_id=1028054 AB4922_RS16390 WP_035389673.1 3163153..3164328(-) (degS) [Bacillus aerius strain KW1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1028054 AB4922_RS16390 WP_035389673.1 3163153..3164328(-) (degS) [Bacillus aerius strain KW1]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTGCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAGCTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGGCAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAACTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTAGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841