Detailed information NTG1027747

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: AB4073_RS02485
• Genome accession: NZ_CP162643
• Coordinates: 527374..529539 (+)
• Length: 721 a.a.
• NCBI ID: WP_368678356.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 128-92
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 522374..534539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4073_RS02465 (AB4073_02465)	pilM	524297..525355 (+)	1059	WP_016143662.1	pilus assembly protein PilM	Machinery gene
AB4073_RS02470 (AB4073_02470)	pilN	525355..525996 (+)	642	WP_016143661.1	PilN domain-containing protein	Machinery gene
AB4073_RS02475 (AB4073_02475)	pilO	525993..526772 (+)	780	WP_368678355.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB4073_RS02480 (AB4073_02480)	pilP	526784..527311 (+)	528	WP_016143659.1	pilus assembly protein PilP	Machinery gene
AB4073_RS02485 (AB4073_02485)	pilQ	527374..529539 (+)	2166	WP_368678356.1	type IV pilus secretin PilQ	Machinery gene
AB4073_RS02490 (AB4073_02490)	aroK	529551..530120 (+)	570	WP_002116987.1	shikimate kinase AroK	-
AB4073_RS02495 (AB4073_02495)	aroB	530149..531231 (+)	1083	WP_368678357.1	3-dehydroquinate synthase	-
AB4073_RS02500 (AB4073_02500)	-	531248..532129 (+)	882	WP_368678358.1	hypothetical protein	-

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77937.37 Da
• Isoelectric Point: 6.3481

>NTDB_id=1027747 AB4073_RS02485 WP_368678356.1 527374..529539(+) (pilQ) [Acinetobacter lactucae strain 128-92]
MNHVFSQFSMGAVAIAIMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFNKAQQNLTQSKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINTAQAIVKPAQTSVMQPQGVSNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVKTLGSKIPAHLAKRLNVNDFATPVSTIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVTELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYARAQDIMSLVTKGSNNSNGLQSTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVTNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQPAKVATGQQVPYQTTTNSAAGATASTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVAGAAPN
GELILNKNQINTNVLVNNGETVILGGVFEQTTSNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=1027747 AB4073_RS02485 WP_368678356.1 527374..529539(+) (pilQ) [Acinetobacter lactucae strain 128-92]
ATGAATCACGTATTCAGTCAGTTTTCTATGGGGGCTGTAGCGATTGCAATTATGCAGGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACGCAAATAGCGGGTCAGGGTACGGAAATTCGAGTGATGTTTAATGGTTTGCCGCCGCAACCAC
AGGCATATCAACTTGAAAATCCTTCACGTTTGATTTTAGATTTTAATAAAGCGCAGCAGAATCTCACACAGTCAAAAGTA
GCGATTGGAACGAATGAGGCGAGCTCTGTCGATGTGAGCTCTGATGATCAGCGTTCACGTTTGACTGTCAATTTAAAAGA
AGCAGGTGCTTTTACTACTCGTATTGAAGGCAATACTTTTATTTTAAAAATTAATACAGCTCAAGCTATAGTGAAGCCCG
CACAAACAAGTGTGATGCAACCCCAAGGTGTTTCAAATATTGGCTTTCAGCGCGGTGGTCAAGGAGAAGGCCTTATTGTT
ATCGATTTGCTAGGTAGCAATACCCCTGTTGATGTGCAGCAACAAGGTAGCAAAGTTGTAGTAAAAACATTAGGTTCTAA
AATTCCCGCGCATTTAGCTAAACGTTTAAACGTAAATGATTTTGCAACGCCTGTTTCGACAATTGAATCTTATAACGAAA
AAGGCAATGGTGTTATTACGATCCAATCCACTGGTAGCTATGAATATATGGCTTATCAGGCGGAAAATAAATTAACCATT
AGCTTAAAGCGTCCGCAGGACAAAAATGTAACCTCTTTATATAAGACACCTAATTACTCTGGGAATAAGCTTTCTCTTGA
TTTCCAAGATATTGAAGTCCGACGCGTTTTACAATTATTGGCAGATTTTACTGGCATTAATATGGTTGCGGCTGACAGTG
TGCAAGGGAACATCACTTTACGTTTAAAAGATGTTCCGTGGGACCAAGCACTTGATATTATTTTAAAAACTAAAAATTTA
GATAAACGTAGAAATGGAAATGTAATTTGGATTGCTCCAGTTACAGAATTGATTAAGGCCGAAGAAGAAGAGGCGAAAGC
TGTTGCACAGAGTGTGAAATTAGCGCCATTGCAAACTGAGTATATTCAACTGAAATATGCACGAGCTCAAGATATTATGA
GCTTAGTTACCAAAGGCTCAAACAATAGTAATGGTTTGCAGAGTACGTCTGGCGGGGGTACTTCAACCTCAACCAATTTA
AATACGGGTGTTGATAGTTTAGGGAATAATGTAGGAAGTTTATTGAGTCCACGTGGAACAATTACTCAAGATGATCGTAC
CAATACCTTAATTATTAATGATACGGCTCAGTCGATTGATCAAATTCGTAAAATGATAGATTTGCTGGATGTACAAGTTA
AACAAGTTATGGTTGAGGCACGTATCGTAAGAGCCTCTACTTCTTTTACGAAAGAGCTTGGTGTTAAATGGGGCATATTA
TCGCAAGGAATTACTAACAATAATAATTTGTTAGTTGGTGGTAGTGAAACGACCTTGTGGAATCTAAGAGAACCTAAAAA
AGATGAAACCACAGGTGGTTATAAATATACGATTGAACGCCCAGATAATTTAAATGTTGATTTAGGGGTAACTAATCCAG
CTGGAAGTATTGCCTTTGGCTTGATCAGTATGTCGGATTTTATGCTTGATCTCGAACTTTCCGCCCTACAAGCTGATGGC
TATGGTGAGGTGATTTCCACACCTAAAGTGATGACTGCAGATAAGCAACCTGCAAAAGTTGCAACAGGCCAACAGGTCCC
ATATCAAACCACGACGAATTCTGCTGCTGGCGCTACAGCAAGTACATCATTTAAAGATGCGCTTTTAAGTTTGGATGTTA
CCCCGAGCATTACGCCTGATGGCAAAATTCAAATGAAATTGGATATTTCAAAGGATTCTGTTGCTGGCGCGGCTCCTAAT
GGTGAGTTAATTTTAAATAAGAATCAGATTAATACTAATGTACTCGTCAATAATGGTGAAACTGTTATTTTAGGAGGAGT
ATTTGAGCAGACGACTTCTAACTCACAAACCAAGGTTCCTTTCTTTGGAGACATTCCTGTAGTTGGGCGTTTATTTAGAA
AAGATGTGAAATCTGATGATAAGCAAGAGTTACTGATTTTCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• AMIN domain (AMIN) (39-118)

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	92.372	100	0.924
pilQ	Acinetobacter baumannii strain A118	92.233	100	0.922
comQ	Acinetobacter baylyi ADP1	74.274	100	0.745
pilQ	Pseudomonas aeruginosa PAK	39.119	100	0.406