Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AB4073_RS02480 | Genome accession | NZ_CP162643 |
| Coordinates | 526784..527311 (+) | Length | 175 a.a. |
| NCBI ID | WP_016143659.1 | Uniprot ID | R8YYN9 |
| Organism | Acinetobacter lactucae strain 128-92 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 521784..532311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4073_RS02465 (AB4073_02465) | pilM | 524297..525355 (+) | 1059 | WP_016143662.1 | pilus assembly protein PilM | Machinery gene |
| AB4073_RS02470 (AB4073_02470) | pilN | 525355..525996 (+) | 642 | WP_016143661.1 | PilN domain-containing protein | Machinery gene |
| AB4073_RS02475 (AB4073_02475) | pilO | 525993..526772 (+) | 780 | WP_368678355.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AB4073_RS02480 (AB4073_02480) | pilP | 526784..527311 (+) | 528 | WP_016143659.1 | pilus assembly protein PilP | Machinery gene |
| AB4073_RS02485 (AB4073_02485) | pilQ | 527374..529539 (+) | 2166 | WP_368678356.1 | type IV pilus secretin PilQ | Machinery gene |
| AB4073_RS02490 (AB4073_02490) | aroK | 529551..530120 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
| AB4073_RS02495 (AB4073_02495) | aroB | 530149..531231 (+) | 1083 | WP_368678357.1 | 3-dehydroquinate synthase | - |
| AB4073_RS02500 (AB4073_02500) | - | 531248..532129 (+) | 882 | WP_368678358.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19275.43 Da Isoelectric Point: 9.7301
>NTDB_id=1027746 AB4073_RS02480 WP_016143659.1 526784..527311(+) (pilP) [Acinetobacter lactucae strain 128-92]
MKLKKILLSLGVGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNNRGQVMALIQTPDHQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKKILLSLGVGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNNRGQVMALIQTPDHQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1027746 AB4073_RS02480 WP_016143659.1 526784..527311(+) (pilP) [Acinetobacter lactucae strain 128-92]
ATGAAATTAAAGAAAATTTTACTTTCTCTTGGGGTGGGCTTGGTTTTAGTCGGATGCGACTCGAGAATTGATGCCGTAAA
TCAGCAAATGGCCGACATACGTAATCAGCCACCGCAAGCTATAGAGCCAGCGCCTGTTTTTACACCTGTCCCACAGTTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCGCTTGCTGCTGAACTCAAGATTATGGCGGGAAAACGG
GTATATCCGAATTTCTCACGAGCACCTCAACCCCTTGAAAGCTATGCATTAGAATCCTTAAATATGAAAGGCAGCATGCG
TAACAACCGTGGGCAAGTCATGGCTCTTATTCAAACACCTGATCATCAAATTGAGCGAGTACAGGTCGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCGACTCAGATTGATCTGGTGGAAATTGTCCCTGATGGACGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTGTTGATTGGACCTGCACCCTAA
ATGAAATTAAAGAAAATTTTACTTTCTCTTGGGGTGGGCTTGGTTTTAGTCGGATGCGACTCGAGAATTGATGCCGTAAA
TCAGCAAATGGCCGACATACGTAATCAGCCACCGCAAGCTATAGAGCCAGCGCCTGTTTTTACACCTGTCCCACAGTTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCGCTTGCTGCTGAACTCAAGATTATGGCGGGAAAACGG
GTATATCCGAATTTCTCACGAGCACCTCAACCCCTTGAAAGCTATGCATTAGAATCCTTAAATATGAAAGGCAGCATGCG
TAACAACCGTGGGCAAGTCATGGCTCTTATTCAAACACCTGATCATCAAATTGAGCGAGTACAGGTCGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCGACTCAGATTGATCTGGTGGAAATTGTCCCTGATGGACGAGAAGGC
TATGTGGAAAGACCAAGAACCTTGGTGTTGATTGGACCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
88 |
100 |
0.88 |
| comL | Acinetobacter baylyi ADP1 |
73.964 |
96.571 |
0.714 |