Detailed information NTG1027680

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB3Z07_RS18390
• Genome accession: NZ_CP162630
• Coordinates: 3723395..3724024 (-)
• Length: 209 a.a.
• NCBI ID: WP_368657435.1
• Uniprot ID: -
• Organism: Metabacillus halosaccharovorans strain Hao 2024
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3718395..3729024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Z07_RS18365 (AB3Z07_18365)	rpsT	3718416..3718682 (+)	267	WP_078432395.1	30S ribosomal protein S20	-
AB3Z07_RS18370 (AB3Z07_18370)	holA	3718774..3719796 (-)	1023	WP_251683845.1	DNA polymerase III subunit delta	-
AB3Z07_RS18375 (AB3Z07_18375)	-	3720156..3720290 (+)	135	WP_078432397.1	YqzM family protein	-
AB3Z07_RS18380 (AB3Z07_18380)	-	3720340..3722664 (-)	2325	WP_251683843.1	DNA internalization-related competence protein ComEC/Rec2	-
AB3Z07_RS18385 (AB3Z07_18385)	-	3722752..3723309 (-)	558	WP_368657434.1	ComE operon protein 2	-
AB3Z07_RS18390 (AB3Z07_18390)	comEA	3723395..3724024 (-)	630	WP_368657435.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB3Z07_RS18395 (AB3Z07_18395)	comER	3724206..3725039 (+)	834	WP_251683838.1	late competence protein ComER	-
AB3Z07_RS18400 (AB3Z07_18400)	-	3725114..3725860 (-)	747	WP_251683837.1	class I SAM-dependent methyltransferase	-
AB3Z07_RS18405 (AB3Z07_18405)	rsfS	3725857..3726213 (-)	357	WP_251683836.1	ribosome silencing factor	-
AB3Z07_RS18410 (AB3Z07_18410)	yqeK	3726213..3726785 (-)	573	WP_251683835.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB3Z07_RS18415 (AB3Z07_18415)	-	3726775..3727347 (-)	573	WP_368657436.1	nicotinate-nucleotide adenylyltransferase	-
AB3Z07_RS18420 (AB3Z07_18420)	yhbY	3727367..3727660 (-)	294	WP_251683833.1	ribosome assembly RNA-binding protein YhbY	-
AB3Z07_RS18425 (AB3Z07_18425)	aroE	3727654..3728496 (-)	843	WP_368657437.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 23327.61 Da
• Isoelectric Point: 4.1506

>NTDB_id=1027680 AB3Z07_RS18390 WP_368657435.1 3723395..3724024(-) (comEA) [Metabacillus halosaccharovorans strain Hao 2024]
MNLQINKKWMIIICISVLIVCFFYYFYAKEPVKSEVVKVEEMDMNEFEETISVNEKEPVDNEDEQSSIVIDVKGAVLKPG
VYEVPVGSRVFEAIQEAGGLSEKADELAVNLASPLQDGMVVYIPIKGETKENPFISQNVAEDPSQKKVNINLATSEELQT
LTGIGPSKAESIISYREEQGPFTKIEDLLEVTGIGDKSFDKLREEITVK

Nucleotide

• Length: 630 bp

>NTDB_id=1027680 AB3Z07_RS18390 WP_368657435.1 3723395..3724024(-) (comEA) [Metabacillus halosaccharovorans strain Hao 2024]
GTGAATCTACAAATAAACAAAAAATGGATGATAATCATTTGTATAAGTGTATTAATTGTTTGTTTTTTTTATTATTTTTA
CGCTAAAGAACCTGTGAAATCTGAAGTCGTTAAGGTGGAAGAAATGGACATGAATGAATTTGAAGAAACCATTTCCGTTA
ATGAAAAGGAACCCGTTGATAATGAAGATGAACAGTCTTCAATTGTTATTGATGTAAAGGGAGCAGTACTAAAACCGGGG
GTTTATGAGGTTCCTGTGGGTTCCAGAGTGTTTGAGGCTATTCAAGAGGCGGGAGGATTAAGTGAAAAAGCTGATGAATT
AGCAGTTAATTTAGCTTCTCCCCTACAGGATGGAATGGTGGTTTATATCCCTATAAAAGGAGAAACAAAAGAAAATCCCT
TTATCTCACAAAATGTTGCTGAAGACCCCTCTCAAAAAAAGGTGAATATTAATCTTGCAACTAGTGAGGAACTTCAAACA
CTAACAGGAATAGGCCCTTCTAAAGCAGAGTCAATTATCTCTTATCGCGAGGAACAAGGTCCTTTCACAAAGATTGAAGA
TCTTCTCGAAGTAACTGGAATTGGAGACAAATCATTTGATAAATTACGTGAAGAAATTACGGTAAAATGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (69-124)

• Helix-hairpin-helix motif (HHH_3) (145-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	48.372	100	0.498
comEA/celA/cilE	Streptococcus mitis NCTC 12261	40.187	100	0.411
comEA/celA/cilE	Streptococcus pneumoniae Rx1	39.72	100	0.407
comEA/celA/cilE	Streptococcus pneumoniae D39	39.72	100	0.407
comEA/celA/cilE	Streptococcus pneumoniae R6	39.72	100	0.407
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	39.234	100	0.392
comEA/celA/cilE	Streptococcus mitis SK321	37.799	100	0.378
comEA	Latilactobacillus sakei subsp. sakei 23K	32.906	100	0.368
comEA	Lactococcus lactis subsp. cremoris KW2	36.538	99.522	0.364