Detailed information NTG1024846

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ABW635_RS00995
• Genome accession: NZ_CP162310
• Coordinates: 156099..156494 (+)
• Length: 131 a.a.
• NCBI ID: WP_003098836.1
• Uniprot ID: A0A3L8GMQ5
• Organism: Streptococcus iniae strain ZQ2205
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 151099..161494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW635_RS00955 (ABW635_00955)	-	151184..151636 (+)	453	WP_003098820.1	hypothetical protein	-
ABW635_RS00960 (ABW635_00960)	-	151646..152302 (+)	657	WP_003098822.1	CPBP family intramembrane glutamic endopeptidase	-
ABW635_RS00965 (ABW635_00965)	proC	152336..153106 (-)	771	WP_003098824.1	pyrroline-5-carboxylate reductase	-
ABW635_RS00970 (ABW635_00970)	pepA	153130..154197 (-)	1068	Protein_143	glutamyl aminopeptidase	-
ABW635_RS00975 (ABW635_00975)	-	154338..154622 (+)	285	WP_003098828.1	DUF4651 domain-containing protein	-
ABW635_RS00980 (ABW635_00980)	-	154619..154936 (+)	318	WP_003098830.1	thioredoxin family protein	-
ABW635_RS00985 (ABW635_00985)	ytpR	154953..155579 (+)	627	WP_003098832.1	YtpR family tRNA-binding protein	-
ABW635_RS00990 (ABW635_00990)	-	155617..156027 (-)	411	WP_003098834.1	GNAT family N-acetyltransferase	-
ABW635_RS00995 (ABW635_00995)	ssbA	156099..156494 (+)	396	WP_003098836.1	single-stranded DNA-binding protein	Machinery gene
ABW635_RS01000 (ABW635_01000)	-	156968..157930 (+)	963	WP_003098839.1	ABC transporter substrate-binding protein	-
ABW635_RS01005 (ABW635_01005)	-	157944..158906 (+)	963	WP_003098841.1	ABC transporter substrate-binding protein	-
ABW635_RS01010 (ABW635_01010)	-	158916..159800 (+)	885	WP_003098842.1	ABC transporter permease	-
ABW635_RS01015 (ABW635_01015)	-	159809..160612 (+)	804	WP_003098843.1	ABC transporter ATP-binding protein	-
ABW635_RS01020 (ABW635_01020)	-	160673..161317 (-)	645	WP_003098844.1	deoxynucleoside kinase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 15061.41 Da
• Isoelectric Point: 5.9574

>NTDB_id=1024846 ABW635_RS00995 WP_003098836.1 156099..156494(+) (ssbA) [Streptococcus iniae strain ZQ2205]
MYNKVVMIGRLVAEPELIKTAKDKSICRVSLAVNRRYKNADGEKQVDFVPMILWGKLAETLVSYGSKGSLMSIDGELRTR
RYEKEGKSHFMMEILCQSFQLLESRAQRAMRENNADNELADLILDEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1024846 ABW635_RS00995 WP_003098836.1 156099..156494(+) (ssbA) [Streptococcus iniae strain ZQ2205]
ATGTATAATAAAGTCGTAATGATTGGCCGCTTGGTTGCAGAACCAGAATTAATAAAAACAGCAAAGGATAAGTCTATTTG
TCGTGTTTCACTAGCAGTCAATAGGCGTTACAAAAATGCTGATGGTGAAAAACAGGTGGATTTTGTCCCAATGATACTTT
GGGGGAAATTAGCTGAGACACTCGTTTCTTATGGCAGCAAGGGAAGTTTGATGTCGATTGATGGTGAATTGCGTACAAGA
CGCTATGAAAAAGAGGGCAAATCTCATTTTATGATGGAGATTTTGTGTCAATCTTTTCAGTTATTAGAAAGTCGGGCACA
AAGAGCCATGCGGGAAAACAATGCTGACAATGAGTTAGCAGACCTCATTTTAGATGAGGAAGAATTACCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A3L8GMQ5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	73.282	100	0.733
ssbB/cilA	Streptococcus pneumoniae Rx1	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae D39	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae R6	67.176	100	0.672
ssbB/cilA	Streptococcus mitis NCTC 12261	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae TIGR4	66.412	100	0.664
ssbB/cilA	Streptococcus mitis SK321	66.412	100	0.664
ssbB	Streptococcus sobrinus strain NIDR 6715-7	65.649	100	0.656
ssbB	Lactococcus lactis subsp. cremoris KW2	57.143	85.496	0.489