Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQN28_RS06895 Genome accession   NZ_LS483430
Coordinates   1369623..1369805 (-) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12044     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364623..1374805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN28_RS06880 (NCTC12044_01368) - 1364885..1365346 (-) 462 WP_002988493.1 deoxycytidylate deaminase -
  DQN28_RS06885 (NCTC12044_01369) - 1365380..1366453 (-) 1074 WP_111686354.1 M24 family metallopeptidase -
  DQN28_RS06890 (NCTC12044_01370) uvrA 1366569..1369397 (-) 2829 WP_111686355.1 excinuclease ABC subunit UvrA Machinery gene
  DQN28_RS06895 (NCTC12044_01371) prx 1369623..1369805 (-) 183 WP_011184907.1 hypothetical protein Regulator
  DQN28_RS06900 (NCTC12044_01372) sda3 1370043..1370843 (+) 801 WP_011285611.1 streptodornase Sda3 -
  DQN28_RS06905 (NCTC12044_01373) - 1371115..1371549 (+) 435 WP_011017966.1 hypothetical protein -
  DQN28_RS06910 (NCTC12044_01374) - 1371599..1372465 (-) 867 WP_011888701.1 DUF334 domain-containing protein -
  DQN28_RS06915 (NCTC12044_01375) - 1372453..1372977 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  DQN28_RS06920 (NCTC12044_01376) - 1373117..1374319 (-) 1203 WP_011054730.1 glucosaminidase domain-containing protein -
  DQN28_RS06925 (NCTC12044_01378) - 1374430..1374615 (-) 186 WP_011054731.1 holin -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=1024486 DQN28_RS06895 WP_011184907.1 1369623..1369805(-) (prx) [Streptococcus pyogenes strain NCTC12044]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1024486 DQN28_RS06895 WP_011184907.1 1369623..1369805(-) (prx) [Streptococcus pyogenes strain NCTC12044]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55