Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AB3G53_RS16470 | Genome accession | NZ_CP161999 |
| Coordinates | 3495853..3496338 (-) | Length | 161 a.a. |
| NCBI ID | WP_000993726.1 | Uniprot ID | A0A242SN80 |
| Organism | Acinetobacter baumannii strain SIMBA061 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3490853..3501338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G53_RS16450 (AB3G53_16450) | - | 3492510..3492893 (+) | 384 | WP_057093630.1 | RidA family protein | - |
| AB3G53_RS16455 (AB3G53_16455) | - | 3493103..3493297 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AB3G53_RS16460 (AB3G53_16460) | bfr | 3493543..3494007 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| AB3G53_RS16465 (AB3G53_16465) | - | 3494049..3495677 (-) | 1629 | WP_002015646.1 | PglL family O-oligosaccharyltransferase | - |
| AB3G53_RS16470 (AB3G53_16470) | pilA | 3495853..3496338 (-) | 486 | WP_000993726.1 | pilin | Machinery gene |
| AB3G53_RS16475 (AB3G53_16475) | - | 3496680..3497240 (-) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| AB3G53_RS16480 (AB3G53_16480) | - | 3497234..3498316 (-) | 1083 | WP_001246384.1 | YgcG family protein | - |
| AB3G53_RS16485 (AB3G53_16485) | - | 3498338..3498928 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| AB3G53_RS16490 (AB3G53_16490) | - | 3499059..3499946 (-) | 888 | WP_001017328.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16591.91 Da Isoelectric Point: 5.0937
>NTDB_id=1023402 AB3G53_RS16470 WP_000993726.1 3495853..3496338(-) (pilA) [Acinetobacter baumannii strain SIMBA061]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=1023402 AB3G53_RS16470 WP_000993726.1 3495853..3496338(-) (pilA) [Acinetobacter baumannii strain SIMBA061]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
45.86 |
97.516 |
0.447 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.558 |
95.652 |
0.398 |
| pilE | Neisseria gonorrhoeae MS11 |
37.736 |
98.758 |
0.373 |
| comP | Acinetobacter baylyi ADP1 |
36.709 |
98.137 |
0.36 |