Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | AB2M35_RS09635 | Genome accession | NZ_CP161902 |
| Coordinates | 1853985..1855235 (+) | Length | 416 a.a. |
| NCBI ID | WP_003231847.1 | Uniprot ID | A0A199WIX6 |
| Organism | Bacillus subtilis strain DYJ22 | ||
| Function | unknown (predicted from homology) Unclear |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1849075..1898514 | 1853985..1855235 | within | 0 |
Gene organization within MGE regions
Location: 1849075..1898514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M35_RS09605 (AB2M35_09605) | ymfH | 1849075..1850361 (+) | 1287 | WP_003244823.1 | pitrilysin family protein | - |
| AB2M35_RS09610 (AB2M35_09610) | efpI | 1850416..1851144 (+) | 729 | WP_003244676.1 | EF-P-5 aminopentanone reductase | - |
| AB2M35_RS09615 (AB2M35_09615) | ymfJ | 1851225..1851482 (+) | 258 | WP_003245199.1 | DUF3243 domain-containing protein | - |
| AB2M35_RS09620 (AB2M35_09620) | - | 1851612..1852403 (+) | 792 | WP_003220998.1 | YmfK family protein | - |
| AB2M35_RS09625 (AB2M35_09625) | rodZ | 1852470..1853336 (+) | 867 | WP_206697876.1 | RodZ family helix-turn-helix domain-containing protein | - |
| AB2M35_RS09630 (AB2M35_09630) | pgsA | 1853386..1853967 (+) | 582 | WP_014479814.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| AB2M35_RS09635 (AB2M35_09635) | cinA | 1853985..1855235 (+) | 1251 | WP_003231847.1 | competence/damage-inducible protein A | Machinery gene |
| AB2M35_RS09640 (AB2M35_09640) | recA | 1855408..1856454 (+) | 1047 | WP_003245789.1 | recombinase RecA | Machinery gene |
| AB2M35_RS09645 (AB2M35_09645) | pbpX | 1856621..1857796 (+) | 1176 | WP_014479815.1 | serine hydrolase | - |
| AB2M35_RS09650 (AB2M35_09650) | rny | 1858072..1859634 (+) | 1563 | WP_003221010.1 | ribonuclease Y | - |
| AB2M35_RS09655 (AB2M35_09655) | ymdB | 1859703..1860497 (+) | 795 | WP_014479816.1 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | - |
| AB2M35_RS09660 (AB2M35_09660) | spoVS | 1860697..1860957 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| AB2M35_RS09665 (AB2M35_09665) | tdh | 1861222..1862265 (+) | 1044 | WP_014479818.1 | L-threonine 3-dehydrogenase | - |
| AB2M35_RS09670 (AB2M35_09670) | kbl | 1862278..1863456 (+) | 1179 | WP_014479819.1 | glycine C-acetyltransferase | - |
| AB2M35_RS09675 (AB2M35_09675) | - | 1863587..1864939 (-) | 1353 | WP_014478984.1 | IS1182 family transposase | - |
| AB2M35_RS09680 (AB2M35_09680) | miaB | 1865185..1866714 (+) | 1530 | WP_014664026.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| AB2M35_RS09685 (AB2M35_09685) | ricA | 1866716..1867147 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | - |
| AB2M35_RS09690 (AB2M35_09690) | cotE | 1867409..1867954 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| AB2M35_RS09695 (AB2M35_09695) | mutS | 1868087..1870663 (+) | 2577 | WP_046160418.1 | DNA mismatch repair protein MutS | - |
| AB2M35_RS09700 (AB2M35_09700) | mutL | 1870679..1872562 (+) | 1884 | WP_041516431.1 | DNA mismatch repair endonuclease MutL | - |
| AB2M35_RS09705 (AB2M35_09705) | - | 1872935..1873081 (+) | 147 | WP_014479823.1 | XtrA/YqaO family protein | - |
| AB2M35_RS09710 (AB2M35_09710) | - | 1873124..1873345 (+) | 222 | Protein_1857 | VWA domain-containing protein | - |
| AB2M35_RS09715 (AB2M35_09715) | - | 1873672..1873920 (+) | 249 | WP_031600520.1 | hypothetical protein | - |
| AB2M35_RS09720 (AB2M35_09720) | - | 1873971..1874333 (-) | 363 | WP_033881685.1 | Ig-like domain-containing protein | - |
| AB2M35_RS09725 (AB2M35_09725) | - | 1874606..1875355 (+) | 750 | WP_014479826.1 | hypothetical protein | - |
| AB2M35_RS09730 (AB2M35_09730) | - | 1875592..1876002 (+) | 411 | Protein_1861 | ArpU family phage packaging/lysis transcriptional regulator | - |
| AB2M35_RS09735 (AB2M35_09735) | - | 1876002..1876531 (+) | 530 | Protein_1862 | tyrosine-type recombinase/integrase | - |
| AB2M35_RS09740 (AB2M35_09740) | - | 1876801..1876953 (+) | 153 | WP_162175547.1 | hypothetical protein | - |
| AB2M35_RS09745 (AB2M35_09745) | - | 1877281..1877430 (+) | 150 | WP_031600526.1 | hypothetical protein | - |
| AB2M35_RS09750 (AB2M35_09750) | - | 1877499..1877816 (+) | 318 | WP_033881687.1 | hypothetical protein | - |
| AB2M35_RS09755 (AB2M35_09755) | - | 1877992..1878237 (+) | 246 | WP_031600528.1 | hypothetical protein | - |
| AB2M35_RS09760 (AB2M35_09760) | - | 1878227..1878841 (+) | 615 | WP_033881688.1 | hypothetical protein | - |
| AB2M35_RS09765 (AB2M35_09765) | - | 1878854..1879078 (+) | 225 | WP_033881690.1 | hypothetical protein | - |
| AB2M35_RS09770 (AB2M35_09770) | - | 1879075..1879449 (+) | 375 | WP_041516434.1 | HNH endonuclease signature motif containing protein | - |
| AB2M35_RS09775 (AB2M35_09775) | - | 1879418..1879549 (+) | 132 | WP_284690376.1 | hypothetical protein | - |
| AB2M35_RS09780 (AB2M35_09780) | - | 1879587..1879757 (+) | 171 | WP_031600530.1 | hypothetical protein | - |
| AB2M35_RS09785 (AB2M35_09785) | - | 1879829..1880362 (+) | 534 | WP_017697674.1 | phage terminase small subunit P27 family | - |
| AB2M35_RS09790 (AB2M35_09790) | - | 1880362..1880529 (+) | 168 | WP_031600532.1 | hypothetical protein | - |
| AB2M35_RS09795 (AB2M35_09795) | - | 1880613..1881860 (-) | 1248 | WP_031600262.1 | IS256-like element ISBsu2 family transposase | - |
| AB2M35_RS09800 (AB2M35_09800) | ymzD | 1882907..1883362 (-) | 456 | WP_072592534.1 | regulatory YrvL family protein | - |
| AB2M35_RS09805 (AB2M35_09805) | - | 1883517..1884074 (-) | 558 | WP_014479830.1 | hypothetical protein | - |
| AB2M35_RS09810 (AB2M35_09810) | pksA | 1884195..1884809 (+) | 615 | WP_014479831.1 | TetR/AcrR family transcriptional regulator | - |
| AB2M35_RS09815 (AB2M35_09815) | - | 1884948..1885304 (-) | 357 | WP_003231786.1 | hypothetical protein | - |
| AB2M35_RS09820 (AB2M35_09820) | ymaE | 1885383..1886207 (-) | 825 | WP_080480852.1 | MBL fold metallo-hydrolase | - |
| AB2M35_RS09825 (AB2M35_09825) | aprX | 1886318..1887646 (-) | 1329 | WP_069837520.1 | serine protease AprX | - |
| AB2M35_RS09830 (AB2M35_09830) | - | 1887871..1888104 (+) | 234 | WP_014476869.1 | hypothetical protein | - |
| AB2M35_RS09835 (AB2M35_09835) | pghC | 1888384..1889091 (+) | 708 | WP_003245758.1 | poly-gamma-glutamate hydrolase family protein | - |
| AB2M35_RS09840 (AB2M35_09840) | ymaD | 1889161..1889613 (+) | 453 | WP_003245175.1 | OsmC family protein | - |
| AB2M35_RS09845 (AB2M35_09845) | ebrB | 1889627..1889980 (-) | 354 | WP_003245163.1 | multidrug efflux SMR transporter subunit EbrB | - |
| AB2M35_RS09850 (AB2M35_09850) | ebrA | 1889994..1890311 (-) | 318 | WP_080480853.1 | multidrug efflux SMR transporter subunit EbrA | - |
| AB2M35_RS09855 (AB2M35_09855) | - | 1890448..1890723 (-) | 276 | WP_029317825.1 | hypothetical protein | - |
| AB2M35_RS09860 (AB2M35_09860) | ymaF | 1890812..1891225 (+) | 414 | WP_003231769.1 | YmaF family protein | - |
| AB2M35_RS09865 (AB2M35_09865) | miaA | 1891325..1892269 (+) | 945 | WP_069837521.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| AB2M35_RS09870 (AB2M35_09870) | hfq | 1892309..1892530 (+) | 222 | WP_003221097.1 | RNA chaperone Hfq | - |
| AB2M35_RS09875 (AB2M35_09875) | ymzC | 1892726..1892998 (+) | 273 | WP_014479841.1 | YmzC family protein | - |
| AB2M35_RS09880 (AB2M35_09880) | - | 1893080..1893310 (+) | 231 | WP_003245262.1 | hypothetical protein | - |
| AB2M35_RS09885 (AB2M35_09885) | nrdI | 1893552..1893944 (+) | 393 | WP_003231758.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| AB2M35_RS09890 (AB2M35_09890) | nrdE | 1893904..1896006 (+) | 2103 | WP_014479842.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| AB2M35_RS09895 (AB2M35_09895) | nrdF | 1896024..1897013 (+) | 990 | WP_003231754.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| AB2M35_RS09900 (AB2M35_09900) | - | 1897063..1897683 (+) | 621 | WP_003245105.1 | hypothetical protein | - |
| AB2M35_RS09905 (AB2M35_09905) | cwlC | 1897747..1898514 (-) | 768 | WP_014479843.1 | sporulation-specific N-acetylmuramoyl-L-alanine amidase | - |
Sequence
Protein
Download Length: 416 a.a. Molecular weight: 45537.85 Da Isoelectric Point: 5.3737
>NTDB_id=1022988 AB2M35_RS09635 WP_003231847.1 1853985..1855235(+) (cinA) [Bacillus subtilis strain DYJ22]
MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDFIIFSGGLGPTKDDL
TKETIANTLGRPLVLNDEAFQSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHESRYYMLLPGPPSEL
RPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAVILERVGEFFYGYDDTSLVKELSIACKEKGITISAAESFTGGLFSEWLTDHSGASKLFAGGVVCYTNDVKQNVLG
VKKETLDRFGAVSKECASELAKGVQKLTGSDIGISFTGVAGPDAQEGHEPGHVFIGISANGKEEVHEFHFAGSRTGIRKR
GAKYGCHLILKLLEQK
MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDFIIFSGGLGPTKDDL
TKETIANTLGRPLVLNDEAFQSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHESRYYMLLPGPPSEL
RPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAVILERVGEFFYGYDDTSLVKELSIACKEKGITISAAESFTGGLFSEWLTDHSGASKLFAGGVVCYTNDVKQNVLG
VKKETLDRFGAVSKECASELAKGVQKLTGSDIGISFTGVAGPDAQEGHEPGHVFIGISANGKEEVHEFHFAGSRTGIRKR
GAKYGCHLILKLLEQK
Nucleotide
Download Length: 1251 bp
>NTDB_id=1022988 AB2M35_RS09635 WP_003231847.1 1853985..1855235(+) (cinA) [Bacillus subtilis strain DYJ22]
ATGGAATTTCCAAAAAAAGCAGAAATAATTGCAGTCGGTTCAGAGCTGCTGCTTGGCCAAATCGCCAATACAAATGCTCA
ATTTATCAGCAAACAGCTCGCTGAAATCGGGGTCAACGTATTTTATCATACAGCGGTCGGAGATAACCCGGAGCGGCTGA
AGCAGGTCATCCGCATTGCTGAAGAACGCTCTGACTTCATTATTTTTTCAGGAGGGCTTGGACCCACAAAAGATGATCTG
ACGAAAGAAACGATTGCAAATACGCTGGGACGTCCGCTTGTGTTAAATGATGAGGCATTCCAATCCATTGAGGACTATTT
CAAACGAACAAAACGCACGATGTCACCTAATAACCGAAAACAGGCGCTTGTGATCGAAGGCTCTGACGTGCTGGCGAATC
ACTTTGGAATGGCCCCGGGAATGCTCACAGAGCATGAATCGCGCTATTATATGCTTCTTCCTGGACCGCCGAGCGAATTG
CGTCCAATGTTTGAAAACGAGGCAAAGCCTCTTCTGCTGAAAAAGATGGGTTCAAATGAAAAAATTGTGTCAACCGTTCT
TCGCTTTTTCGGTATCGGTGAATCTCAGCTTGAAGCCGATTTGGAAGATATTATTGATGCACAAACCAATCCGACAATTG
CGCCTTTGGCGGCTGATGGAGAGGTGACGCTGCGTCTGACAGCCAAACACGCCGATGAAAAGGAAACAGAGCGTCTGTTA
AAAGAAACAGAGGCCGTTATCTTAGAGCGTGTCGGTGAATTTTTCTATGGTTACGATGATACTTCTCTTGTAAAAGAGCT
ATCTATAGCGTGCAAGGAAAAAGGCATTACAATTTCTGCGGCAGAAAGCTTTACCGGAGGGCTGTTTTCTGAATGGCTGA
CGGATCATAGCGGTGCCTCAAAATTATTTGCCGGGGGCGTTGTTTGCTATACAAACGACGTGAAGCAGAATGTGCTTGGT
GTCAAGAAGGAAACATTAGATCGTTTTGGGGCGGTCAGCAAGGAGTGCGCATCCGAACTGGCTAAGGGTGTTCAAAAACT
CACTGGCAGCGATATCGGCATCAGCTTTACTGGTGTAGCAGGACCTGATGCTCAAGAAGGGCATGAGCCTGGGCATGTGT
TTATCGGCATTTCCGCAAATGGTAAAGAAGAGGTTCACGAGTTTCACTTTGCGGGCTCCAGAACGGGGATCAGAAAACGC
GGCGCTAAATACGGCTGCCATTTAATCTTAAAGCTTTTAGAGCAAAAATAA
ATGGAATTTCCAAAAAAAGCAGAAATAATTGCAGTCGGTTCAGAGCTGCTGCTTGGCCAAATCGCCAATACAAATGCTCA
ATTTATCAGCAAACAGCTCGCTGAAATCGGGGTCAACGTATTTTATCATACAGCGGTCGGAGATAACCCGGAGCGGCTGA
AGCAGGTCATCCGCATTGCTGAAGAACGCTCTGACTTCATTATTTTTTCAGGAGGGCTTGGACCCACAAAAGATGATCTG
ACGAAAGAAACGATTGCAAATACGCTGGGACGTCCGCTTGTGTTAAATGATGAGGCATTCCAATCCATTGAGGACTATTT
CAAACGAACAAAACGCACGATGTCACCTAATAACCGAAAACAGGCGCTTGTGATCGAAGGCTCTGACGTGCTGGCGAATC
ACTTTGGAATGGCCCCGGGAATGCTCACAGAGCATGAATCGCGCTATTATATGCTTCTTCCTGGACCGCCGAGCGAATTG
CGTCCAATGTTTGAAAACGAGGCAAAGCCTCTTCTGCTGAAAAAGATGGGTTCAAATGAAAAAATTGTGTCAACCGTTCT
TCGCTTTTTCGGTATCGGTGAATCTCAGCTTGAAGCCGATTTGGAAGATATTATTGATGCACAAACCAATCCGACAATTG
CGCCTTTGGCGGCTGATGGAGAGGTGACGCTGCGTCTGACAGCCAAACACGCCGATGAAAAGGAAACAGAGCGTCTGTTA
AAAGAAACAGAGGCCGTTATCTTAGAGCGTGTCGGTGAATTTTTCTATGGTTACGATGATACTTCTCTTGTAAAAGAGCT
ATCTATAGCGTGCAAGGAAAAAGGCATTACAATTTCTGCGGCAGAAAGCTTTACCGGAGGGCTGTTTTCTGAATGGCTGA
CGGATCATAGCGGTGCCTCAAAATTATTTGCCGGGGGCGTTGTTTGCTATACAAACGACGTGAAGCAGAATGTGCTTGGT
GTCAAGAAGGAAACATTAGATCGTTTTGGGGCGGTCAGCAAGGAGTGCGCATCCGAACTGGCTAAGGGTGTTCAAAAACT
CACTGGCAGCGATATCGGCATCAGCTTTACTGGTGTAGCAGGACCTGATGCTCAAGAAGGGCATGAGCCTGGGCATGTGT
TTATCGGCATTTCCGCAAATGGTAAAGAAGAGGTTCACGAGTTTCACTTTGCGGGCTCCAGAACGGGGATCAGAAAACGC
GGCGCTAAATACGGCTGCCATTTAATCTTAAAGCTTTTAGAGCAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| cinA | Streptococcus mitis NCTC 12261 |
45.694 |
100 |
0.459 |
| cinA | Streptococcus mitis SK321 |
45.694 |
100 |
0.459 |
| cinA | Streptococcus pneumoniae TIGR4 |
45.455 |
100 |
0.457 |
| cinA | Streptococcus mutans UA159 |
46.005 |
99.279 |
0.457 |
| cinA | Streptococcus pneumoniae Rx1 |
45.215 |
100 |
0.454 |
| cinA | Streptococcus pneumoniae R6 |
45.215 |
100 |
0.454 |
| cinA | Streptococcus pneumoniae D39 |
44.976 |
100 |
0.452 |
| cinA | Streptococcus suis isolate S10 |
41.379 |
90.625 |
0.375 |