Detailed information NTG1019980

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQM51_RS06270
• Genome accession: NZ_LS483356
• Coordinates: 1185591..1186553 (-)
• Length: 320 a.a.
• NCBI ID: WP_002983995.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8230
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1180591..1191553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM51_RS06255 (NCTC8230_01252)	-	1181428..1182135 (-)	708	WP_002984000.1	O-methyltransferase	-
DQM51_RS06260 (NCTC8230_01253)	-	1182201..1183397 (-)	1197	WP_111713307.1	OFA family MFS transporter	-
DQM51_RS06265 (NCTC8230_01254)	pepF	1183773..1185578 (-)	1806	WP_111713308.1	oligoendopeptidase F	Regulator
DQM51_RS06270 (NCTC8230_01255)	coiA	1185591..1186553 (-)	963	WP_002983995.1	competence protein CoiA	Machinery gene
DQM51_RS06275 (NCTC8230_01256)	-	1186848..1187564 (-)	717	WP_002995774.1	pseudouridine synthase	-
DQM51_RS06280 (NCTC8230_01257)	nagB	1187683..1188387 (-)	705	WP_002995779.1	glucosamine-6-phosphate deaminase	-
DQM51_RS06285 (NCTC8230_01258)	queA	1188589..1189617 (+)	1029	WP_002995782.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
DQM51_RS06290 (NCTC8230_01259)	-	1189624..1190844 (+)	1221	WP_002983986.1	DUF3114 domain-containing protein	-
DQM51_RS06295 (NCTC8230_01260)	-	1190958..1191548 (-)	591	WP_002983984.1	serine hydrolase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37801.25 Da
• Isoelectric Point: 10.2848

>NTDB_id=1019980 DQM51_RS06270 WP_002983995.1 1185591..1186553(-) (coiA) [Streptococcus pyogenes strain NCTC8230]
MTKILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=1019980 DQM51_RS06270 WP_002983995.1 1185591..1186553(-) (coiA) [Streptococcus pyogenes strain NCTC8230]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTCGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTTTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTGCTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCATAATATTATGGAAATGTTTCGGTTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTACAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403