Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ63_RS10815 | Genome accession | NZ_CP158481 |
| Coordinates | 2144526..2144996 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain BSN88 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2114826..2173793 | 2144526..2144996 | within | 0 |
Gene organization within MGE regions
Location: 2114826..2173793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ63_RS10595 (UXQ63_010595) | scn | 2114826..2115176 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| UXQ63_RS10600 (UXQ63_010600) | - | 2115861..2116310 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| UXQ63_RS10605 (UXQ63_010605) | - | 2116405..2116740 (-) | 336 | Protein_2052 | SH3 domain-containing protein | - |
| UXQ63_RS10610 (UXQ63_010610) | sak | 2117390..2117881 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| UXQ63_RS10615 (UXQ63_010615) | - | 2118072..2118827 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| UXQ63_RS10620 (UXQ63_010620) | - | 2118839..2119093 (-) | 255 | WP_000611512.1 | phage holin | - |
| UXQ63_RS10625 (UXQ63_010625) | - | 2119145..2119252 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| UXQ63_RS10630 (UXQ63_010630) | pepG1 | 2119305..2119439 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| UXQ63_RS10635 (UXQ63_010635) | - | 2119631..2119927 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| UXQ63_RS10640 (UXQ63_010640) | - | 2119985..2120272 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| UXQ63_RS10645 (UXQ63_010645) | - | 2120319..2120471 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| UXQ63_RS10650 (UXQ63_010650) | - | 2120461..2124246 (-) | 3786 | WP_000582165.1 | phage tail spike protein | - |
| UXQ63_RS10655 (UXQ63_010655) | - | 2124262..2125746 (-) | 1485 | WP_000567394.1 | phage tail domain-containing protein | - |
| UXQ63_RS10660 (UXQ63_010660) | - | 2125743..2130272 (-) | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| UXQ63_RS10665 (UXQ63_010665) | - | 2130329..2130466 (-) | 138 | WP_001549167.1 | hypothetical protein | - |
| UXQ63_RS10670 (UXQ63_010670) | - | 2130517..2130867 (-) | 351 | WP_001096354.1 | hypothetical protein | - |
| UXQ63_RS10675 (UXQ63_010675) | - | 2130917..2131156 (-) | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| UXQ63_RS10680 (UXQ63_010680) | - | 2131183..2131827 (-) | 645 | WP_000260578.1 | major tail protein | - |
| UXQ63_RS10685 (UXQ63_010685) | - | 2131831..2132235 (-) | 405 | WP_000565500.1 | hypothetical protein | - |
| UXQ63_RS10690 (UXQ63_010690) | - | 2132232..2132636 (-) | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| UXQ63_RS10695 (UXQ63_010695) | - | 2132633..2132995 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| UXQ63_RS10700 (UXQ63_010700) | - | 2132979..2133263 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| UXQ63_RS10705 (UXQ63_010705) | - | 2133253..2133537 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| UXQ63_RS10710 (UXQ63_010710) | - | 2133557..2134702 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| UXQ63_RS10715 (UXQ63_010715) | - | 2134726..2135463 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| UXQ63_RS10720 (UXQ63_010720) | - | 2135447..2136634 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| UXQ63_RS10725 (UXQ63_010725) | - | 2136650..2138311 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| UXQ63_RS10730 (UXQ63_010730) | - | 2138308..2138652 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| UXQ63_RS10735 (UXQ63_010735) | - | 2138782..2139081 (-) | 300 | WP_000988336.1 | HNH endonuclease | - |
| UXQ63_RS10740 (UXQ63_010740) | - | 2139313..2139729 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| UXQ63_RS10745 (UXQ63_010745) | - | 2139757..2139957 (-) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| UXQ63_RS10750 (UXQ63_010750) | - | 2139957..2140106 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| UXQ63_RS10755 (UXQ63_010755) | - | 2140103..2140489 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| UXQ63_RS10760 (UXQ63_010760) | - | 2140486..2140692 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| UXQ63_RS10765 (UXQ63_010765) | - | 2140689..2140934 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| UXQ63_RS10770 (UXQ63_010770) | - | 2140971..2141504 (-) | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| UXQ63_RS10775 (UXQ63_010775) | - | 2141497..2141739 (-) | 243 | WP_000700108.1 | hypothetical protein | - |
| UXQ63_RS10780 (UXQ63_010780) | - | 2141729..2141965 (-) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| UXQ63_RS10785 (UXQ63_010785) | - | 2141958..2142329 (-) | 372 | WP_001549172.1 | hypothetical protein | - |
| UXQ63_RS10790 (UXQ63_010790) | - | 2142338..2142580 (-) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| UXQ63_RS10795 (UXQ63_010795) | - | 2142584..2142952 (-) | 369 | WP_000101273.1 | SA1788 family PVL leukocidin-associated protein | - |
| UXQ63_RS10800 (UXQ63_010800) | - | 2142965..2143369 (-) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| UXQ63_RS10805 (UXQ63_010805) | - | 2143378..2143596 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| UXQ63_RS10810 (UXQ63_010810) | - | 2143603..2144496 (-) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| UXQ63_RS10815 (UXQ63_010815) | ssbA | 2144526..2144996 (-) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ63_RS10820 (UXQ63_010820) | - | 2144997..2145614 (-) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| UXQ63_RS10825 (UXQ63_010825) | - | 2145695..2146615 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| UXQ63_RS10830 (UXQ63_010830) | - | 2146617..2148560 (-) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| UXQ63_RS10835 (UXQ63_010835) | - | 2148569..2148832 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| UXQ63_RS10840 (UXQ63_010840) | - | 2148841..2149101 (-) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| UXQ63_RS10845 (UXQ63_010845) | - | 2149082..2149401 (-) | 320 | Protein_2100 | DUF2482 family protein | - |
| UXQ63_RS10850 (UXQ63_010850) | - | 2149496..2149657 (-) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| UXQ63_RS10855 (UXQ63_010855) | - | 2149654..2149974 (-) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| UXQ63_RS10860 (UXQ63_010860) | - | 2150033..2150263 (+) | 231 | WP_000549548.1 | hypothetical protein | - |
| UXQ63_RS10865 (UXQ63_010865) | - | 2150260..2150436 (-) | 177 | WP_001001356.1 | hypothetical protein | - |
| UXQ63_RS10870 (UXQ63_010870) | - | 2150452..2151204 (-) | 753 | WP_001148641.1 | phage antirepressor KilAC domain-containing protein | - |
| UXQ63_RS10875 (UXQ63_010875) | - | 2151255..2151584 (+) | 330 | WP_000180411.1 | hypothetical protein | - |
| UXQ63_RS10880 (UXQ63_010880) | - | 2151573..2151788 (-) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| UXQ63_RS10885 (UXQ63_010885) | - | 2151804..2152067 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| UXQ63_RS10890 (UXQ63_010890) | - | 2152064..2152237 (-) | 174 | WP_001801500.1 | hypothetical protein | - |
| UXQ63_RS10895 (UXQ63_010895) | - | 2152200..2152913 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| UXQ63_RS10900 (UXQ63_010900) | - | 2152929..2153861 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| UXQ63_RS10905 (UXQ63_010905) | - | 2153867..2154208 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| UXQ63_RS10910 (UXQ63_010910) | - | 2154412..2154594 (+) | 183 | WP_000705246.1 | hypothetical protein | - |
| UXQ63_RS10915 (UXQ63_010915) | - | 2154672..2155385 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| UXQ63_RS10920 (UXQ63_010920) | - | 2155576..2156613 (+) | 1038 | WP_000857199.1 | site-specific integrase | - |
| UXQ63_RS10925 (UXQ63_010925) | sph | 2156664..2157494 (+) | 831 | Protein_2116 | sphingomyelin phosphodiesterase | - |
| UXQ63_RS10930 (UXQ63_010930) | lukG | 2157732..2158748 (-) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| UXQ63_RS10935 (UXQ63_010935) | lukH | 2158770..2159825 (-) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| UXQ63_RS10940 (UXQ63_010940) | - | 2160260..2161483 (+) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| UXQ63_RS10945 (UXQ63_010945) | - | 2161855..2162700 (-) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| UXQ63_RS10950 (UXQ63_010950) | - | 2162762..2163673 (-) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| UXQ63_RS10955 (UXQ63_010955) | - | 2163834..2165141 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| UXQ63_RS10960 (UXQ63_010960) | - | 2165994..2166437 (-) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| UXQ63_RS10965 (UXQ63_010965) | - | 2166543..2166979 (-) | 437 | Protein_2124 | hypothetical protein | - |
| UXQ63_RS10970 (UXQ63_010970) | - | 2167297..2167887 (-) | 591 | WP_001293058.1 | terminase small subunit | - |
| UXQ63_RS10975 (UXQ63_010975) | - | 2167884..2168096 (-) | 213 | WP_000128898.1 | hypothetical protein | - |
| UXQ63_RS10980 (UXQ63_010980) | - | 2168157..2168703 (+) | 547 | Protein_2127 | site-specific integrase | - |
| UXQ63_RS10985 (UXQ63_010985) | groL | 2168798..2170414 (-) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| UXQ63_RS10990 (UXQ63_010990) | groES | 2170490..2170774 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| UXQ63_RS10995 (UXQ63_010995) | mroQ | 2170949..2171692 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| UXQ63_RS11000 (UXQ63_011000) | - | 2171717..2172970 (-) | 1254 | WP_000120307.1 | SdrH family protein | - |
| UXQ63_RS11005 (UXQ63_011005) | - | 2173167..2173793 (+) | 627 | WP_000522384.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=1011453 UXQ63_RS10815 WP_000934753.1 2144526..2144996(-) (ssbA) [Staphylococcus aureus strain BSN88]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1011453 UXQ63_RS10815 WP_000934753.1 2144526..2144996(-) (ssbA) [Staphylococcus aureus strain BSN88]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |