Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ63_RS10145 | Genome accession | NZ_CP158481 |
| Coordinates | 2038534..2039004 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain BSN88 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2005383..2048637 | 2038534..2039004 | within | 0 |
Gene organization within MGE regions
Location: 2005383..2048637
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ63_RS09905 (UXQ63_009905) | - | 2005383..2005898 (-) | 516 | WP_000163283.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| UXQ63_RS09910 (UXQ63_009910) | - | 2006029..2006190 (-) | 162 | WP_001005407.1 | SE1561 family protein | - |
| UXQ63_RS09915 (UXQ63_009915) | - | 2006517..2006618 (+) | 102 | WP_011447034.1 | hypothetical protein | - |
| UXQ63_RS09920 (UXQ63_009920) | - | 2006944..2007129 (-) | 186 | WP_001286805.1 | hypothetical protein | - |
| UXQ63_RS09925 (UXQ63_009925) | - | 2007131..2007241 (-) | 111 | WP_000139423.1 | hypothetical protein | - |
| UXQ63_RS09930 (UXQ63_009930) | - | 2007312..2007464 (-) | 153 | WP_001788502.1 | hypothetical protein | - |
| UXQ63_RS09935 (UXQ63_009935) | - | 2007707..2009152 (-) | 1446 | WP_048519673.1 | SH3 domain-containing protein | - |
| UXQ63_RS09940 (UXQ63_009940) | - | 2009133..2009570 (-) | 438 | WP_000354135.1 | phage holin | - |
| UXQ63_RS09945 (UXQ63_009945) | - | 2009626..2010021 (-) | 396 | WP_015978363.1 | hypothetical protein | - |
| UXQ63_RS09950 (UXQ63_009950) | - | 2010026..2011198 (-) | 1173 | WP_196431931.1 | BppU family phage baseplate upper protein | - |
| UXQ63_RS09955 (UXQ63_009955) | - | 2011211..2013109 (-) | 1899 | WP_196431930.1 | glucosaminidase domain-containing protein | - |
| UXQ63_RS09960 (UXQ63_009960) | - | 2013246..2013545 (-) | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| UXQ63_RS09965 (UXQ63_009965) | - | 2013586..2013759 (-) | 174 | WP_001800921.1 | XkdX family protein | - |
| UXQ63_RS09970 (UXQ63_009970) | - | 2013769..2014146 (-) | 378 | WP_000406973.1 | DUF2977 domain-containing protein | - |
| UXQ63_RS09975 (UXQ63_009975) | - | 2014146..2015969 (-) | 1824 | WP_337257078.1 | BppU family phage baseplate upper protein | - |
| UXQ63_RS09980 (UXQ63_009980) | - | 2015969..2017879 (-) | 1911 | WP_337257080.1 | hypothetical protein | - |
| UXQ63_RS09985 (UXQ63_009985) | - | 2017894..2019795 (-) | 1902 | WP_000152714.1 | SGNH/GDSL hydrolase family protein | - |
| UXQ63_RS09990 (UXQ63_009990) | - | 2019804..2020751 (-) | 948 | WP_001557971.1 | phage tail family protein | - |
| UXQ63_RS09995 (UXQ63_009995) | - | 2020764..2024228 (-) | 3465 | WP_048519670.1 | membrane protein | - |
| UXQ63_RS10000 (UXQ63_010000) | - | 2024245..2024589 (-) | 345 | WP_000105584.1 | hypothetical protein | - |
| UXQ63_RS10005 (UXQ63_010005) | - | 2024619..2024984 (-) | 366 | WP_001100163.1 | tail assembly chaperone | - |
| UXQ63_RS10010 (UXQ63_010010) | - | 2025046..2025627 (-) | 582 | WP_000002583.1 | phage major tail protein, TP901-1 family | - |
| UXQ63_RS10015 (UXQ63_010015) | - | 2025646..2026029 (-) | 384 | WP_048519669.1 | hypothetical protein | - |
| UXQ63_RS10020 (UXQ63_010020) | - | 2026041..2026388 (-) | 348 | WP_001017811.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| UXQ63_RS10025 (UXQ63_010025) | - | 2026388..2026690 (-) | 303 | WP_001268304.1 | hypothetical protein | - |
| UXQ63_RS10030 (UXQ63_010030) | - | 2026687..2027019 (-) | 333 | WP_000208959.1 | phage head-tail connector protein | - |
| UXQ63_RS10035 (UXQ63_010035) | - | 2027028..2027315 (-) | 288 | WP_001114085.1 | hypothetical protein | - |
| UXQ63_RS10040 (UXQ63_010040) | - | 2027337..2028311 (-) | 975 | WP_048519668.1 | phage major capsid protein | - |
| UXQ63_RS10045 (UXQ63_010045) | - | 2028325..2028945 (-) | 621 | WP_000392146.1 | DUF4355 domain-containing protein | - |
| UXQ63_RS10050 (UXQ63_010050) | - | 2028933..2029026 (-) | 94 | Protein_1941 | hypothetical protein | - |
| UXQ63_RS10055 (UXQ63_010055) | - | 2029054..2029224 (-) | 171 | WP_000072208.1 | hypothetical protein | - |
| UXQ63_RS10060 (UXQ63_010060) | - | 2029297..2030292 (-) | 996 | WP_048519667.1 | minor capsid protein | - |
| UXQ63_RS10065 (UXQ63_010065) | - | 2030299..2031834 (-) | 1536 | WP_048519666.1 | phage portal protein | - |
| UXQ63_RS10070 (UXQ63_010070) | - | 2031845..2033122 (-) | 1278 | WP_000169944.1 | PBSX family phage terminase large subunit | - |
| UXQ63_RS10075 (UXQ63_010075) | - | 2033109..2033549 (-) | 441 | WP_001003272.1 | terminase small subunit | - |
| UXQ63_RS10080 (UXQ63_010080) | - | 2033736..2034158 (-) | 423 | WP_000162699.1 | RinA family phage transcriptional activator | - |
| UXQ63_RS10085 (UXQ63_010085) | - | 2034182..2034328 (-) | 147 | WP_000989998.1 | hypothetical protein | - |
| UXQ63_RS10090 (UXQ63_010090) | - | 2034329..2034502 (-) | 174 | WP_048519665.1 | transcriptional activator RinB | - |
| UXQ63_RS10095 (UXQ63_010095) | - | 2034515..2034973 (-) | 459 | WP_048519664.1 | hypothetical protein | - |
| UXQ63_RS10100 (UXQ63_010100) | - | 2034966..2035115 (-) | 150 | WP_031926954.1 | DUF1381 domain-containing protein | - |
| UXQ63_RS10105 (UXQ63_010105) | - | 2035284..2035529 (-) | 246 | WP_031905177.1 | hypothetical protein | - |
| UXQ63_RS10110 (UXQ63_010110) | - | 2035566..2036099 (-) | 534 | WP_048519663.1 | dUTP pyrophosphatase | - |
| UXQ63_RS10115 (UXQ63_010115) | - | 2036092..2036340 (-) | 249 | WP_048519662.1 | DUF1024 family protein | - |
| UXQ63_RS10120 (UXQ63_010120) | - | 2036355..2036597 (-) | 243 | WP_337257089.1 | SAV1978 family virulence-associated passenger protein | - |
| UXQ63_RS10125 (UXQ63_010125) | - | 2036601..2036969 (-) | 369 | WP_000101273.1 | SA1788 family PVL leukocidin-associated protein | - |
| UXQ63_RS10130 (UXQ63_010130) | - | 2036982..2037386 (-) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| UXQ63_RS10135 (UXQ63_010135) | - | 2037395..2037613 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| UXQ63_RS10140 (UXQ63_010140) | - | 2037620..2038504 (-) | 885 | WP_000148298.1 | DnaD domain protein | - |
| UXQ63_RS10145 (UXQ63_010145) | ssbA | 2038534..2039004 (-) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ63_RS10150 (UXQ63_010150) | - | 2039005..2039622 (-) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| UXQ63_RS10155 (UXQ63_010155) | - | 2039703..2040623 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| UXQ63_RS10160 (UXQ63_010160) | - | 2040625..2042580 (-) | 1956 | WP_337257095.1 | AAA family ATPase | - |
| UXQ63_RS10165 (UXQ63_010165) | - | 2042577..2042840 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| UXQ63_RS10170 (UXQ63_010170) | - | 2042849..2043109 (-) | 261 | WP_000291488.1 | DUF1108 family protein | - |
| UXQ63_RS10175 (UXQ63_010175) | - | 2043202..2043363 (-) | 162 | WP_000048124.1 | DUF1270 family protein | - |
| UXQ63_RS10180 (UXQ63_010180) | - | 2043356..2043577 (-) | 222 | WP_000977377.1 | hypothetical protein | - |
| UXQ63_RS10185 (UXQ63_010185) | - | 2043591..2044040 (-) | 450 | WP_048519647.1 | hypothetical protein | - |
| UXQ63_RS10190 (UXQ63_010190) | - | 2044056..2044805 (-) | 750 | WP_001148588.1 | phage antirepressor KilAC domain-containing protein | - |
| UXQ63_RS10195 (UXQ63_010195) | - | 2044862..2045071 (+) | 210 | WP_000033736.1 | hypothetical protein | - |
| UXQ63_RS10200 (UXQ63_010200) | - | 2045060..2045230 (-) | 171 | WP_000398751.1 | hypothetical protein | - |
| UXQ63_RS10205 (UXQ63_010205) | - | 2045246..2045464 (-) | 219 | WP_001198673.1 | helix-turn-helix transcriptional regulator | - |
| UXQ63_RS10210 (UXQ63_010210) | - | 2045606..2046325 (+) | 720 | WP_048519646.1 | XRE family transcriptional regulator | - |
| UXQ63_RS10215 (UXQ63_010215) | - | 2046395..2046562 (+) | 168 | WP_000705238.1 | hypothetical protein | - |
| UXQ63_RS10220 (UXQ63_010220) | - | 2046702..2047382 (+) | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| UXQ63_RS10225 (UXQ63_010225) | - | 2047591..2048637 (+) | 1047 | WP_001145722.1 | tyrosine-type recombinase/integrase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=1011450 UXQ63_RS10145 WP_000934753.1 2038534..2039004(-) (ssbA) [Staphylococcus aureus strain BSN88]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1011450 UXQ63_RS10145 WP_000934753.1 2038534..2039004(-) (ssbA) [Staphylococcus aureus strain BSN88]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |