Detailed information NTG1010151

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ABNG17_RS17150
• Genome accession: NZ_CP158181
• Coordinates: 3181953..3182639 (-)
• Length: 228 a.a.
• NCBI ID: WP_212045588.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain RI06-95
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176953..3187639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNG17_RS17115 (ABNG17_17100)	fliW	3177086..3177520 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
ABNG17_RS17120 (ABNG17_17105)	-	3177549..3178127 (-)	579	WP_003213106.1	DUF6470 family protein	-
ABNG17_RS17125 (ABNG17_17110)	flgL	3178176..3179087 (-)	912	WP_137054345.1	flagellar hook-associated protein FlgL	-
ABNG17_RS17130 (ABNG17_17115)	flgK	3179097..3180617 (-)	1521	WP_003213544.1	flagellar hook-associated protein FlgK	-
ABNG17_RS17135 (ABNG17_17120)	-	3180633..3181115 (-)	483	WP_050944342.1	flagellar protein FlgN	-
ABNG17_RS17140 (ABNG17_17125)	flgM	3181134..3181397 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
ABNG17_RS17145 (ABNG17_17130)	-	3181477..3181896 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
ABNG17_RS17150 (ABNG17_17135)	comFC	3181953..3182639 (-)	687	WP_212045588.1	ComF family protein	Machinery gene
ABNG17_RS17155 (ABNG17_17140)	-	3182636..3182929 (-)	294	WP_050944343.1	competence protein ComFB	-
ABNG17_RS17160 (ABNG17_17145)	comFA	3182996..3184120 (-)	1125	WP_335349975.1	DEAD/DEAH box helicase	Machinery gene
ABNG17_RS17165 (ABNG17_17150)	-	3184495..3185337 (-)	843	WP_003213402.1	DegV family protein	-
ABNG17_RS17170 (ABNG17_17155)	degU	3185555..3186244 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ABNG17_RS17175 (ABNG17_17160)	degS	3186309..3187484 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26054.55 Da
• Isoelectric Point: 9.8858

>NTDB_id=1010151 ABNG17_RS17150 WP_212045588.1 3181953..3182639(-) (comFC) [Bacillus pumilus strain RI06-95]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSNDQLCQDCSMWKERPDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVRAVFKRSFSMKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QSKQSKKKKNERLYQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=1010151 ABNG17_RS17150 WP_212045588.1 3181953..3182639(-) (comFC) [Bacillus pumilus strain RI06-95]
TTGATCTGCCTCATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAACGATC
AATTATGTCAAGACTGTTCCATGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCGAGCAGTATTTAAGCGCTCTTTTTCAATGAAAGAACCTGTCCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTAGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCGCTTGTGAAAATACAT
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTATATCAAAAAGGAATGTTTCAAATCAAGCAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (163-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.435	100	0.509
comFC/cflB	Streptococcus mitis NCTC 12261	39.301	100	0.395
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae TIGR4	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae Rx1	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae D39	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae R6	39.301	100	0.395