Detailed information NTG1010154

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABNG17_RS17175
• Genome accession: NZ_CP158181
• Coordinates: 3186309..3187484 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain RI06-95
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3181309..3192484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNG17_RS17145 (ABNG17_17130)	-	3181477..3181896 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
ABNG17_RS17150 (ABNG17_17135)	comFC	3181953..3182639 (-)	687	WP_212045588.1	ComF family protein	Machinery gene
ABNG17_RS17155 (ABNG17_17140)	-	3182636..3182929 (-)	294	WP_050944343.1	competence protein ComFB	-
ABNG17_RS17160 (ABNG17_17145)	comFA	3182996..3184120 (-)	1125	WP_335349975.1	DEAD/DEAH box helicase	Machinery gene
ABNG17_RS17165 (ABNG17_17150)	-	3184495..3185337 (-)	843	WP_003213402.1	DegV family protein	-
ABNG17_RS17170 (ABNG17_17155)	degU	3185555..3186244 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ABNG17_RS17175 (ABNG17_17160)	degS	3186309..3187484 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ABNG17_RS17180 (ABNG17_17165)	-	3187706..3188374 (+)	669	WP_003212936.1	YigZ family protein	-
ABNG17_RS17185 (ABNG17_17170)	-	3188359..3189447 (+)	1089	WP_212045589.1	LCP family protein	-
ABNG17_RS17190 (ABNG17_17175)	-	3189482..3190549 (-)	1068	WP_003212692.1	MraY family glycosyltransferase	-
ABNG17_RS17195 (ABNG17_17180)	-	3190684..3191874 (-)	1191	WP_226805380.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1010154 ABNG17_RS17175 WP_003213166.1 3186309..3187484(-) (degS) [Bacillus pumilus strain RI06-95]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1010154 ABNG17_RS17175 WP_003213166.1 3186309..3187484(-) (degS) [Bacillus pumilus strain RI06-95]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTTAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACTATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGTCAAGTTGGCGTGTTACTT
GAAGATGCTCAAGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTATCCCGTGA
AATTCACGACGGTCCGGCCCAAATGCTGGCAAACGTAATGATGCGTTCCGAATTAATTGAACGTATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTC
ACGAAAGACTTTGTTACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841