Detailed information NTG1006586

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: ABKJ37_RS17215
• Genome accession: NZ_CP157386
• Coordinates: 3631522..3632769 (-)
• Length: 415 a.a.
• NCBI ID: WP_348921213.1
• Uniprot ID: -
• Organism: Enterococcus rotai strain CMTB-CA6
• Function: require for competence (predicted from homology) Unclear

Genomic Context

Location: 3626522..3637769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKJ37_RS17200	-	3626731..3628383 (-)	1653	WP_348921212.1	peptide ABC transporter substrate-binding protein	-
ABKJ37_RS17205	rny	3628552..3630108 (-)	1557	WP_025871645.1	ribonuclease Y	-
ABKJ37_RS17210	recA	3630365..3631414 (-)	1050	WP_010762249.1	recombinase RecA	Machinery gene
ABKJ37_RS17215	cinA	3631522..3632769 (-)	1248	WP_348921213.1	competence/damage-inducible protein A	Machinery gene
ABKJ37_RS17220	-	3633267..3634445 (+)	1179	WP_348921214.1	hypothetical protein	-
ABKJ37_RS17225	-	3634861..3635484 (-)	624	WP_348921215.1	NAD(P)-dependent oxidoreductase	-
ABKJ37_RS17230	-	3635555..3635977 (-)	423	WP_208929945.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 415 a.a.
• Molecular weight: 45435.98 Da
• Isoelectric Point: 4.7410

>NTDB_id=1006586 ABKJ37_RS17215 WP_348921213.1 3631522..3632769(-) (cinA) [Enterococcus rotai strain CMTB-CA6]
MKAEIIAVGTELLLGQVVNTNATFLSQELADLGIEVYYHTVVGDNPQRLEQLLVEAEERSDLIVLCGGLGPTDDDLTKDT
VAAHIHHSLVQDEQALARLYDFFKFSKRSMTENNLRQTLMIEDGIPIQNPTGLAVGTLITKEDTTYLLLPGPPNEMKPMF
QQHARPLLEERFPQKEQLISRVLRFYGIGESQLVTDLKELIDSQTNPTIAPYAKPNEVTLRLTAKIADEIVGQQLLDELE
AKVMAKVGAYFYGYGDENSLVKVTVDELKKQGKTITAAESLTAGLFQSTLGDISGVSEVFKGGFVTYSAETKARFLGIAP
SLLEKEGTISETCAIAMAEQARILADADFAVSFTGVAGPDELEGQPAGTVWIGLATKGQPTIAVLQHFNRDRRSIRQSAV
MKGLDLILRAVNKKK

Nucleotide

• Length: 1248 bp

>NTDB_id=1006586 ABKJ37_RS17215 WP_348921213.1 3631522..3632769(-) (cinA) [Enterococcus rotai strain CMTB-CA6]
ATGAAAGCAGAGATCATTGCAGTTGGTACAGAGTTGTTATTAGGACAGGTTGTCAATACAAATGCAACGTTTCTATCACA
AGAGTTAGCAGATTTGGGAATCGAGGTGTATTATCATACCGTTGTTGGAGACAATCCACAGCGTTTAGAACAATTATTAG
TTGAGGCTGAGGAGCGTAGTGATTTGATCGTTTTATGCGGCGGCTTAGGACCAACGGATGATGACTTAACGAAAGATACA
GTAGCAGCACATATCCATCACTCTTTAGTCCAAGATGAACAGGCACTTGCTCGTCTTTACGACTTTTTCAAGTTTTCGAA
AAGAAGTATGACAGAAAATAATTTAAGACAAACGTTGATGATCGAAGATGGTATTCCCATTCAAAACCCTACAGGTTTAG
CTGTTGGTACCCTGATTACCAAAGAGGATACGACCTATCTATTACTACCAGGCCCACCTAATGAAATGAAGCCGATGTTT
CAACAACACGCTCGCCCATTATTAGAAGAACGTTTCCCTCAAAAGGAGCAGTTGATTTCCAGAGTGTTGAGGTTTTACGG
TATCGGGGAGTCGCAGCTGGTTACAGATTTGAAAGAATTGATTGACTCACAGACAAACCCAACAATCGCACCTTATGCTA
AGCCTAATGAAGTAACGTTACGTTTAACGGCAAAAATTGCTGACGAAATTGTAGGGCAACAGTTATTGGATGAACTAGAA
GCTAAGGTCATGGCTAAAGTTGGTGCGTATTTTTATGGTTATGGAGATGAAAATAGTTTAGTCAAAGTTACGGTTGATGA
GTTAAAGAAACAAGGGAAAACCATTACTGCTGCAGAAAGCTTAACTGCTGGACTATTTCAAAGTACTTTAGGGGATATTT
CTGGTGTTTCTGAAGTATTCAAAGGTGGATTTGTTACTTATTCTGCTGAGACAAAAGCTCGTTTTTTAGGCATCGCTCCT
TCGTTATTAGAAAAAGAAGGGACGATTAGCGAGACTTGCGCCATCGCAATGGCCGAACAAGCAAGAATATTAGCAGATGC
AGATTTTGCAGTATCATTTACTGGTGTGGCAGGACCTGATGAGTTAGAAGGACAACCAGCGGGAACTGTCTGGATAGGAC
TAGCTACAAAAGGACAGCCGACCATAGCTGTGCTTCAACATTTCAACCGTGATCGACGTTCTATTCGCCAAAGTGCTGTG
ATGAAAGGTTTAGACCTGATTTTAAGAGCAGTAAATAAGAAAAAATAA

Domains

Predicted by InterproScan.

• Competence-damaged protein (CinA) (259-410)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

• Damage-inducible protein CinA KH domain (CinA_KH) (180-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mutans UA159	53.902	98.795	0.533
cinA	Streptococcus mitis SK321	52.029	100	0.525
cinA	Streptococcus mitis NCTC 12261	51.79	100	0.523
cinA	Streptococcus pneumoniae TIGR4	51.551	100	0.52
cinA	Streptococcus pneumoniae Rx1	51.074	100	0.516
cinA	Streptococcus pneumoniae R6	51.074	100	0.516
cinA	Streptococcus pneumoniae D39	51.074	100	0.516
cinA	Bacillus subtilis subsp. subtilis str. 168	49.395	99.518	0.492
cinA	Streptococcus suis isolate S10	42.683	98.795	0.422