Detailed information NTG1005324

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: FGL06_RS00640
• Genome accession: NZ_LR594042
• Coordinates: 98438..98878 (+)
• Length: 146 a.a.
• NCBI ID: WP_126437530.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC8133
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 93438..103878

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL06_RS00620 (NCTC8133_00123)	-	95816..96184 (+)	369	WP_021141429.1	DUF1033 family protein	-
FGL06_RS00625 (NCTC8133_00124)	comGA	96253..97194 (+)	942	WP_027968018.1	competence type IV pilus ATPase ComGA	Machinery gene
FGL06_RS00630 (NCTC8133_00125)	comGB	97118..98161 (+)	1044	WP_164554342.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL06_RS00635 (NCTC8133_00126)	comGC	98161..98463 (+)	303	WP_021141433.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL06_RS00640 (NCTC8133_00127)	comGD	98438..98878 (+)	441	WP_126437530.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGL06_RS00645 (NCTC8133_00128)	comGE	98832..99125 (+)	294	WP_039697664.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGL06_RS00650 (NCTC8133_00129)	comGF	99109..99546 (+)	438	WP_126437531.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL06_RS00655 (NCTC8133_00130)	comGG	99533..99868 (+)	336	WP_003067902.1	competence type IV pilus minor pilin ComGG	Machinery gene
FGL06_RS00660 (NCTC8133_00131)	comGH	99922..100878 (+)	957	WP_024344497.1	class I SAM-dependent methyltransferase	Machinery gene
FGL06_RS00665 (NCTC8133_00132)	-	100932..102128 (+)	1197	WP_138083561.1	acetate kinase	-
FGL06_RS00670 (NCTC8133_00133)	-	102286..102483 (+)	198	WP_021141442.1	helix-turn-helix transcriptional regulator	-
FGL06_RS00675 (NCTC8133_00134)	-	102538..102990 (+)	453	WP_126437532.1	ABC transporter permease	-
FGL06_RS00680 (NCTC8133_00135)	-	103002..103637 (+)	636	WP_027968028.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16385.90 Da
• Isoelectric Point: 9.6144

>NTDB_id=1005324 FGL06_RS00640 WP_126437530.1 98438..98878(+) (comGD) [Streptococcus equinus strain NCTC8133]
MKKLNLKNKKIRAFTLLESLLTLGISCFIVIMLSNSVSSIFQTVEEKLFFLSFEHCYRDTQKLASLKQDNQVLTISQDGI
SNSVAHISLPETVSVVENYKIVFDNAGGNSSLAKVKFQTKNQAIDYQLYIGSGNYKKTETKSLHTP

Nucleotide

• Length: 441 bp

>NTDB_id=1005324 FGL06_RS00640 WP_126437530.1 98438..98878(+) (comGD) [Streptococcus equinus strain NCTC8133]
ATGAAAAAGCTAAACCTAAAGAATAAAAAAATCCGAGCTTTCACCCTTTTAGAGAGTCTACTAACTTTGGGAATATCTTG
TTTTATCGTTATTATGCTCTCAAACTCTGTGAGTAGTATTTTTCAGACAGTCGAAGAAAAGTTGTTCTTTTTATCGTTTG
AGCATTGCTATCGTGACACTCAAAAACTAGCTAGCCTTAAACAAGACAATCAAGTTCTGACAATTTCACAAGACGGCATT
TCAAATAGTGTGGCTCATATAAGTTTGCCAGAGACGGTATCAGTCGTTGAAAATTATAAAATTGTTTTTGATAATGCTGG
GGGCAATTCATCTCTTGCAAAAGTAAAATTTCAGACGAAGAATCAGGCTATTGATTATCAATTATATATAGGAAGTGGTA
ATTATAAAAAGACAGAAACTAAAAGCTTACATACTCCTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	50.37	92.466	0.466
comGD	Streptococcus mutans UA140	50.758	90.411	0.459
comGD	Streptococcus mutans UA159	50.758	90.411	0.459
comGD/cglD	Streptococcus mitis NCTC 12261	45.775	97.26	0.445
comGD/cglD	Streptococcus pneumoniae Rx1	47.727	90.411	0.432
comGD/cglD	Streptococcus pneumoniae D39	47.727	90.411	0.432
comGD/cglD	Streptococcus pneumoniae R6	47.727	90.411	0.432
comGD/cglD	Streptococcus pneumoniae TIGR4	46.97	90.411	0.425
comGD/cglD	Streptococcus mitis SK321	46.97	90.411	0.425