Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ABFT51_RS13470 Genome accession   NZ_CP157265
Coordinates   2916666..2918516 (+) Length   616 a.a.
NCBI ID   WP_348625189.1    Uniprot ID   -
Organism   Paenibacillus peoriae strain MHJL1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2911666..2923516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT51_RS13445 (ABFT51_13445) - 2911836..2912480 (+) 645 WP_348625185.1 SDR family oxidoreductase -
  ABFT51_RS13450 (ABFT51_13450) - 2912654..2913676 (+) 1023 WP_348625186.1 NADH:flavin oxidoreductase/NADH oxidase -
  ABFT51_RS13455 (ABFT51_13455) - 2913756..2913920 (+) 165 WP_348625187.1 xenobiotic reductase b -
  ABFT51_RS13460 (ABFT51_13460) - 2914425..2914835 (+) 411 WP_013310356.1 MarR family transcriptional regulator -
  ABFT51_RS13465 (ABFT51_13465) rcrP 2914910..2916673 (+) 1764 WP_348625188.1 ABC transporter ATP-binding protein Regulator
  ABFT51_RS13470 (ABFT51_13470) rcrQ 2916666..2918516 (+) 1851 WP_348625189.1 ABC transporter ATP-binding protein Regulator
  ABFT51_RS13475 (ABFT51_13475) - 2918637..2918945 (+) 309 WP_348625190.1 hypothetical protein -
  ABFT51_RS13480 (ABFT51_13480) - 2919215..2919424 (+) 210 WP_348625191.1 hypothetical protein -
  ABFT51_RS13485 (ABFT51_13485) - 2919381..2919728 (+) 348 WP_348625192.1 hypothetical protein -

Sequence


Protein


Download         Length: 616 a.a.        Molecular weight: 67888.47 Da        Isoelectric Point: 6.1587

>NTDB_id=1005323 ABFT51_RS13470 WP_348625189.1 2916666..2918516(+) (rcrQ) [Paenibacillus peoriae strain MHJL1]
MDKNEHTVDSQQMKMNQRGPMGKGPAGGSGAGEKANNFKKTISQLVSYSKAYVPMIILAMVLGLVGSTLNVIGPDKLSDI
ANLIQEGIVTGIDVSAVQKIVLVLALLYGFGLIFNYFQGFITATVSQRLTKKMRTELSRKIDHMPLKYFDSTSYGNVLSR
VTNDVDTIGQTLNNSLGTLVSALATFVGALIMMLYTNWIMTVTGIIATLIGFCLMSVIMKHSQKYFVAQQAELGQINGHI
EETYAGHNVVKVYNGEQAAKEVFHGINSRLYTNAWKSQFMSGLMMPVMMFIGNFGYVAVCVVGALLVNQQTITIGTIVAF
MVYIRLFTQPLSQLAQAATNLQSAAAASERVFEFLGEEELADERHKTIKLETAKGEVEFKHVRFGYNADRMIIKDFSMKA
EAGQKIAIVGPTGAGKTTLVNLLMRFYELNDGEIYIDGTPISQLTRENIHELFCMVLQDTWLFEGTIRDNIVFSKDHVTD
EQVEAACRAVGLHSFIKTLPQGYDTVLDDKANLSAGQKQLITIARAMIEDSPMLILDEATSSVDTRTELLIQQAMDQLTV
GKTSFVIAHRLSTIKNADLILVMKDGDIIEMGNHEELLAKGGFYADLYNSQFEHAS

Nucleotide


Download         Length: 1851 bp        

>NTDB_id=1005323 ABFT51_RS13470 WP_348625189.1 2916666..2918516(+) (rcrQ) [Paenibacillus peoriae strain MHJL1]
ATGGATAAGAATGAACACACCGTCGACAGCCAGCAAATGAAAATGAATCAGCGAGGTCCCATGGGTAAAGGACCCGCGGG
GGGCAGTGGTGCTGGTGAAAAAGCGAATAATTTTAAAAAGACCATTAGCCAGCTTGTATCCTACAGCAAGGCCTATGTGC
CTATGATTATACTCGCTATGGTACTGGGCCTGGTCGGCTCTACCCTCAACGTGATTGGCCCCGATAAGCTCAGTGATATT
GCCAACCTGATTCAGGAAGGAATCGTAACCGGGATTGATGTAAGTGCTGTTCAGAAGATTGTTCTTGTATTGGCGCTTTT
ATATGGATTTGGTCTTATTTTTAACTATTTCCAGGGCTTCATTACGGCAACCGTCTCACAGCGTCTTACAAAGAAGATGC
GGACAGAGCTGTCTCGAAAAATCGATCATATGCCTTTGAAGTATTTTGACTCTACGAGTTACGGTAATGTGCTTAGCCGT
GTAACCAACGATGTCGATACTATTGGACAAACGTTAAACAACAGTCTCGGCACGCTTGTCAGTGCGCTGGCTACCTTCGT
GGGCGCCTTGATTATGATGCTGTATACGAACTGGATCATGACCGTTACCGGAATTATAGCTACGCTGATCGGCTTTTGCC
TGATGAGCGTGATTATGAAGCATTCACAGAAATACTTTGTAGCACAGCAAGCGGAGCTTGGCCAGATCAACGGTCATATC
GAAGAAACCTATGCTGGTCATAACGTAGTCAAGGTATATAACGGGGAACAAGCAGCCAAGGAAGTGTTTCATGGTATTAA
CAGCCGCTTATATACAAATGCATGGAAGTCCCAATTCATGTCTGGTCTGATGATGCCAGTCATGATGTTCATTGGAAATT
TTGGTTATGTCGCGGTCTGTGTCGTGGGAGCTTTGCTGGTCAACCAACAGACTATAACTATTGGAACTATTGTCGCCTTC
ATGGTGTATATTCGTCTGTTTACACAGCCCTTGTCGCAGCTGGCACAGGCCGCAACCAATCTGCAGTCAGCGGCTGCCGC
CAGTGAACGTGTATTCGAATTTCTGGGTGAAGAAGAATTGGCAGATGAGCGTCACAAGACCATAAAGCTGGAAACTGCCA
AAGGGGAGGTCGAATTCAAACATGTCCGTTTCGGCTATAATGCAGATCGTATGATCATCAAGGACTTCTCCATGAAAGCT
GAAGCTGGTCAGAAAATTGCCATTGTCGGTCCGACAGGCGCAGGTAAGACCACGCTCGTGAATTTGCTCATGCGGTTTTA
TGAGCTGAACGATGGAGAAATCTACATTGACGGCACCCCGATTAGCCAATTAACGCGCGAGAATATTCATGAATTATTCT
GTATGGTGCTTCAGGATACCTGGCTGTTCGAAGGAACGATTCGTGACAATATCGTCTTTTCCAAAGATCATGTTACCGAT
GAGCAGGTGGAAGCTGCATGTAGAGCGGTGGGTCTGCACAGCTTCATTAAAACACTGCCGCAGGGCTATGATACAGTGCT
GGATGACAAAGCCAATCTCTCTGCCGGTCAAAAGCAATTGATTACCATTGCAAGAGCCATGATTGAAGATTCACCCATGC
TCATTCTGGATGAGGCCACAAGCTCGGTCGATACGCGTACGGAATTGCTGATTCAACAAGCGATGGACCAGCTGACTGTG
GGGAAAACCTCCTTTGTGATTGCTCACCGACTTTCGACGATCAAGAATGCGGATCTGATTCTGGTCATGAAGGACGGTGA
CATTATCGAAATGGGTAACCATGAGGAATTGTTGGCTAAAGGCGGCTTCTATGCCGATCTATACAATAGTCAGTTTGAAC
ATGCATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.672

93.669

0.531


Multiple sequence alignment