Escherichia coli strain 2013C-41871

TA loci of Escherichia coli strain 2013C-4187

Number of TA loci: experimental0; insolico21

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA099304 IS/Tn Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS04955 (hicA) C6993_RS04960 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA099305 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS05370 (hipA) C6993_RS05375 (hipB) hipBA/HipA-HipB
in_silico TA099306 Prophage Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS09090 (parE_1) C6993_RS09085 (paaA) paaR-paaA-parE/-
in_silico TA099315 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS10530 (yoeB) C6993_RS10535 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA099316 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS13390 (vapC) C6993_RS13395 (vapB) vapBC/VapC-VagC
in_silico TA099317 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS14910 (higB) C6993_RS14905 (higA) higBA (relBE)/HigB-HigA
in_silico TA099318 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS15280 (mazF) C6993_RS15285 (mazE) mazEF/PRK09907-MazE
in_silico TA099320 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS17490 (yhaV) C6993_RS17485 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA099321 IS/Tn Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS21790 (higB) C6993_RS21795 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA099323 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS23700 (chpB) C6993_RS23705 (chpS) chpSB/PRK09812-ChpS
in_silico TA099327 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS26535 (yafQ) C6993_RS26540 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA099328 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS27670 (itaT) C6993_RS27675 (itaR) itaRT/DUF1778(antitoxin)
in_silico TA099329 - Escherichia coli strain 2013C-4187 (chromosome) NZ_CP027546 C6993_RS27845 (Hha) C6993_RS27850 (TomB) Hha-TomB/-
in_silico TA099330 Plasmid IScluster/Tn Escherichia coli strain 2013C-4187 (plasmid unnamed) NZ_CP027547 C6993_RS30055 (vagD) C6993_RS30060 (vagC) vagCD/VapC-VagC
experimentalExperimentally validated     insolicoBioinformatically predicted