MGE detailed information
MGE type: Mobilizable plasmid MGE length: 95367 bp
Accession: NZ_CP027547 Location: 1..95367 Organism: Escherichia coli strain 2013C-4187 Replicon: plasmid unnamed
Accession: NZ_CP027547 Location: 1..95367 Organism: Escherichia coli strain 2013C-4187 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6993_RS29620 () | 91..1643 | - | 1553 | Protein_0 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS29625 () | 1663..2010 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS29630 () | 2007..2681 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS30580 () | 2612..3031 | + | 420 | WP_136139077.1 | DUF1449 family protein | - |
| C6993_RS29645 () | 3079..3291 | - | 213 | Protein_4 | IS3 family transposase ISSfl10 | Transposase |
| C6993_RS29650 () | 3353..3526 | + | 174 | Protein_5 | IS66 family transposase | - |
| C6993_RS29655 () | 3969..7871 | + | 3903 | WP_106889344.1 | Serine protease EspP | VF |
| C6993_RS29665 () | 8415..8627 | + | 213 | Protein_7 | IS3 family transposase ISSfl10 | Transposase |
| C6993_RS29670 () | 8675..9088 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| C6993_RS29680 () | 9087..10300 | + | 1214 | WP_169072758.1 | IS3 family transposase IS1203 | Transposase |
| C6993_RS29685 () | 10341..11029 | - | 689 | Protein_10 | IS3 family transposase IS600 | Transposase |
| C6993_RS29690 () | 11068..11388 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| C6993_RS29695 () | 11609..14328 | - | 2720 | Protein_12 | Protein TraI | Relaxase |
| C6993_RS29700 () | 14340..14672 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| C6993_RS29705 () | 14904..15239 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C6993_RS29710 () | 15325..16173 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| C6993_RS29720 () | 16522..16717 | + | 196 | Protein_16 | hypothetical protein | - |
| C6993_RS29725 () | 16751..17002 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6993_RS29730 () | 17033..17278 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| C6993_RS29735 () | 17278..18168 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| C6993_RS29740 () | 18233..18499 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| C6993_RS29745 () | 18592..19026 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| C6993_RS30795 () | 19132..19752 | + | 621 | WP_162137195.1 | hypothetical protein | - |
| C6993_RS29760 () | 19754..20254 | - | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| C6993_RS30800 () | 20716..21313 | - | 598 | Protein_24 | hypothetical protein | - |
| C6993_RS29775 () | 21310..22029 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6993_RS30805 () | 22026..22274 | - | 249 | Protein_26 | conjugation system SOS inhibitor PsiB | - |
| C6993_RS30810 () | 22269..22508 | - | 240 | Protein_27 | hypothetical protein | - |
| C6993_RS29785 () | 22553..22987 | - | 435 | WP_000274418.1 | DUF1380 family protein | - |
| C6993_RS29790 () | 22999..23217 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| C6993_RS29795 () | 23217..23900 | - | 684 | WP_032324142.1 | DNA methylase | - |
| C6993_RS29800 () | 23976..24287 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| C6993_RS30815 () | 24284..25187 | - | 904 | Protein_32 | DUF1281 domain-containing protein | - |
| C6993_RS29810 () | 25460..26419 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C6993_RS29815 () | 26419..26814 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| C6993_RS29820 () | 26894..27473 | - | 580 | Protein_35 | IS3 family transposase | - |
| C6993_RS29830 () | 28741..28928 | - | 188 | Protein_37 | IS3 family transposase IS629 | Transposase |
| C6993_RS29835 () | 29042..29431 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C6993_RS29840 () | 29475..31684 | - | 2210 | Protein_39 | Catalase-peroxidase | VF |
| C6993_RS29860 () | 33876..34853 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| C6993_RS29865 () | 35100..36671 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| C6993_RS29870 () | 36691..37038 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C6993_RS29875 () | 37038..37715 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C6993_RS29885 () | 37756..37950 | + | 195 | WP_106913852.1 | transposase | - |
| C6993_RS29890 () | 38004..38678 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS29895 () | 38675..39022 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS29900 () | 39042..40594 | + | 1553 | Protein_48 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS29905 () | 40628..41017 | + | 390 | Protein_49 | IS91 family transposase ISMno23 | Transposase |
| C6993_RS29915 () | 41418..41783 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6993_RS29920 () | 41783..42970 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6993_RS29930 () | 43561..44568 | + | 1008 | Protein_52 | IS91 family transposase ISEc37 | Transposase |
| C6993_RS29935 () | 45188..46697 | + | 1510 | Protein_53 | ISL3 family transposase | - |
| C6993_RS29940 () | 46748..46862 | - | 115 | Protein_54 | IS3 family transposase | - |
| C6993_RS29945 () | 46949..47335 | + | 387 | Protein_55 | IS66 family transposase ISEc23 | Transposase |
| C6993_RS29950 () | 47406..48558 | + | 1153 | Protein_56 | IS3 family transposase | - |
| C6993_RS29955 () | 48570..50070 | + | 1501 | Protein_57 | IS66 family transposase | - |
| C6993_RS29960 () | 50137..50545 | - | 409 | Protein_58 | IS3 family transposase | - |
| C6993_RS29965 () | 50552..50782 | + | 231 | WP_001443774.1 | transposase | - |
| C6993_RS29970 () | 50897..60398 | + | 9502 | Protein_60 | Toxin B | VF |
| C6993_RS29985 () | 61359..62390 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| C6993_RS30000 () | 63099..63740 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| C6993_RS30005 () | 63881..64546 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| C6993_RS30015 () | 64813..65172 | + | 360 | Protein_64 | DUF1449 family protein | - |
| C6993_RS30020 () | 65206..66758 | - | 1553 | Protein_65 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS30025 () | 66778..67125 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS30030 () | 67122..67796 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6993_RS30035 () | 67850..68236 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| C6993_RS30040 () | 68364..69224 | + | 861 | WP_000704534.1 | putative protein YcjY | VF |
| C6993_RS30595 () | 69713..69988 | + | 276 | WP_157776129.1 | hypothetical protein | - |
| C6993_RS30050 () | 71253..71798 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| C6993_RS30055 () | 71960..72376 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C6993_RS30060 () | 72373..72603 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C6993_RS30075 () | 73165..73578 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| C6993_RS30080 () | 73580..74362 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| C6993_RS30085 () | 74535..74882 | + | 348 | WP_106889347.1 | colicin M immunity protein | - |
| C6993_RS30090 () | 74934..76090 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6993_RS30095 () | 76163..76354 | - | 192 | Protein_79 | lipid II-degrading bacteriocin | - |
| C6993_RS30100 () | 76358..76501 | - | 144 | Protein_80 | transcriptional regulator | - |
| C6993_RS30105 () | 76568..78007 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6993_RS30110 () | 78011..80132 | - | 2122 | Protein_82 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6993_RS30120 () | 80182..83177 | - | 2996 | Protein_83 | Hemolysin, chromosomal | VF |
| C6993_RS30125 () | 83179..83694 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6993_RS30135 () | 84217..84869 | - | 653 | Protein_85 | IS3 family transposase IS629 | Transposase |
| C6993_RS30145 () | 86343..87164 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C6993_RS30150 () | 87164..88270 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C6993_RS30155 () | 88364..90085 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6993_RS30160 () | 90159..91156 | + | 998 | Protein_89 | Lipid A biosynthesis myristoyltransferase | VF |
| C6993_RS30165 () | 91209..91397 | + | 189 | Protein_90 | hypothetical protein | - |
| C6993_RS30170 () | 91460..92998 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| C6993_RS30175 () | 93048..93394 | - | 347 | Protein_92 | IS66 family transposase ISEc8 | Transposase |
| C6993_RS30185 () | 93698..94042 | + | 345 | WP_001368185.1 | hypothetical protein | - |
| C6993_RS30190 () | 93993..95179 | + | 1187 | Protein_94 | IS91 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|