TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family higA (AT6146) Predicted domain TIGR02607 (HigA)
Locus tag orf2309 Length 94 a.a.
Coordinates 2437427..2437711 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf2300 2433051..2433482 - 432 ORF2300 Predicted ORF by PRODIGAL Version 1.20 -
orf2301 2433828..2434043 + 216 ORF2301 Predicted ORF by PRODIGAL Version 1.20 -
orf2302 2434145..2434282 + 138 ORF2302 Predicted ORF by PRODIGAL Version 1.20 -
orf2303 2434439..2436136 + 1698 ORF2303 Predicted ORF by PRODIGAL Version 1.20 -
orf2304 2436270..2437280 + 1011 ORF2304 Predicted ORF by PRODIGAL Version 1.20 -
orf2305 2437427..2437711 + 285 ORF2305 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf2306 2437762..2438415 - 654 ORF2306 Predicted ORF by PRODIGAL Version 1.20 -
orf2307 2438408..2439292 - 885 ORF2307 Predicted ORF by PRODIGAL Version 1.20 -
orf2308 2439305..2441716 - 2412 ORF2308 Predicted ORF by PRODIGAL Version 1.20 -
orf2309 2441765..2442352 - 588 ORF2309 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 10401.08 Da        Isoelectric Point: 8.8567

>ORF2305 Orphan_TA_49 Antitoxin
MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVI
GSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ

Download         Length: 285 bp

>ORF2305 Orphan_TA_49 Antitoxin
ATGAAAATGGCCAATCATCCCCGCCCGGGGGACATTATTCAGGAATCACTGGACGAACTT
AATGTCAGCCTGCGCGAGTTTGCCAGAGCAATGGAAATTGCTCCCTCAACGGCAAGCCGA
TTGCTGACCGGAAAAGCAGCTTTGACACCAGAAATGGCGATTAAACTTTCCGTGGTGATC
GGCAGTTCGCCGCAAATGTGGCTGAATCTGCAAAACGCCTGGAGTCTGGCAGAGGCAGAA
AAAACGGTGGATGTGTCGCGACTACGCCGTCTGGTTACGCAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT6146 Proteus vulgaris

39.535

82.692

0.362
AT6083 Pseudomonas putida KT2440

34.667

75.758

0.277
AT6124 Haemophilus influenzae 86-028NP

32.895

71.028

0.266
AT10161 Pseudomonas aeruginosa PA14 strain MA3 isolate DTU_MIE

35.616

72.277

0.277
AT10032 Pseudomonas aeruginosa PAO1

34.247

72.277

0.266
AT171 Vibrio cholerae O1 biovar El Tor str. N16961

35.294

64.762

0.255
AT10133 Acetobacter pasteurianus strain Ab3

29.73

20.442

0.234
AT611 Staphylococcus aureus subsp. aureus MW2

27.119

55.14

0.17