MGE detailed information
MGE type: Integron MGE length: 93521 bp
Accession: NZ_CP063421 Location: 153082..246602 Organism: Vibrio cholerae strain VC_hf7 Replicon: chromosome
Accession: NZ_CP063421 Location: 153082..246602 Organism: Vibrio cholerae strain VC_hf7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INP70_RS14475 () | 148401..149531 | + | 1131 | WP_000139208.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| INP70_RS14480 () | 149824..151752 | + | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
| INP70_RS14485 () | 151756..152307 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| INP70_RS14490 () | 152411..152605 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| INP70_RS14495 () | 152647..153000 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| INP70_RS14500 () | 153082..154044 | - | 963 | WP_000841992.1 | IS91 family transposase ISAzo26 | Transposase |
| INP70_RS14505 () | 154289..154762 | + | 474 | WP_000703246.1 | Dihydrofolate reductase type 1 | ARG |
| INP70_RS14510 () | 154747..154869 | + | 123 | WP_080007274.1 | DUF3265 domain-containing protein | - |
| INP70_RS14515 () | 154896..155369 | + | 474 | WP_000703246.1 | Dihydrofolate reductase type 1 | ARG |
| INP70_RS14520 () | 155387..155476 | + | 90 | WP_102137306.1 | DUF3265 domain-containing protein | - |
| INP70_RS14525 () | 155503..155976 | + | 474 | WP_000703246.1 | Dihydrofolate reductase type 1 | ARG |
| INP70_RS14530 () | 155961..156083 | + | 123 | WP_080007274.1 | DUF3265 domain-containing protein | - |
| INP70_RS14535 () | 156269..156451 | + | 183 | WP_000947620.1 | DUF645 family protein | - |
| INP70_RS14540 () | 156646..157179 | + | 534 | WP_000210269.1 | hypothetical protein | - |
| INP70_RS14545 () | 157316..157831 | + | 516 | WP_001201532.1 | lipocalin family protein | - |
| INP70_RS14550 () | 157979..158422 | + | 444 | WP_148499030.1 | hypothetical protein | - |
| INP70_RS14555 () | 158726..158986 | + | 261 | WP_161602983.1 | DUF3709 domain-containing protein | - |
| INP70_RS14560 () | 159253..159678 | + | 426 | WP_002023452.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14565 () | 160474..160599 | + | 126 | WP_002023455.1 | DUF645 family protein | - |
| INP70_RS14570 () | 160603..160656 | + | 54 | Protein_140 | DUF645 family protein | - |
| INP70_RS14575 () | 160873..161607 | + | 735 | WP_000653371.1 | hypothetical protein | - |
| INP70_RS14580 () | 161749..162237 | + | 489 | WP_000424237.1 | hypothetical protein | - |
| INP70_RS14585 () | 162371..162796 | + | 426 | WP_000403002.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14590 () | 163001..163390 | + | 390 | WP_000491267.1 | VOC family protein | - |
| INP70_RS14595 () | 163871..163981 | + | 111 | WP_089072380.1 | DUF3265 domain-containing protein | - |
| INP70_RS14600 () | 164214..164321 | + | 108 | WP_088132626.1 | DUF645 family protein | - |
| INP70_RS14605 () | 164544..165059 | + | 516 | WP_000100088.1 | hypothetical protein | VF |
| INP70_RS14610 () | 165249..165515 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| INP70_RS14615 () | 165502..165747 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| INP70_RS14620 () | 165888..166424 | + | 537 | WP_172790006.1 | nucleotidyltransferase family protein | - |
| INP70_RS14625 () | 166481..166573 | + | 93 | WP_192858804.1 | acetyltransferase | - |
| INP70_RS14630 () | 166561..167487 | + | 927 | WP_000377813.1 | hypothetical protein | - |
| INP70_RS14635 () | 167625..168572 | + | 948 | WP_000688114.1 | phospholipase D family protein | - |
| INP70_RS14640 () | 168726..169151 | + | 426 | WP_001287987.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| INP70_RS14645 () | 169457..169639 | + | 183 | WP_000947620.1 | DUF645 family protein | - |
| INP70_RS14650 () | 169924..170202 | + | 279 | WP_000280315.1 | DUF3709 domain-containing protein | - |
| INP70_RS14655 () | 170519..170932 | + | 414 | WP_000049417.1 | VOC family protein | - |
| INP70_RS14660 () | 171125..172111 | - | 987 | WP_001170902.1 | Sulfate-binding protein | VF |
| INP70_RS14665 () | 172345..172740 | + | 396 | WP_000046952.1 | hypothetical protein | - |
| INP70_RS14670 () | 172891..173379 | + | 489 | WP_000424237.1 | hypothetical protein | - |
| INP70_RS14675 () | 173521..174018 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| INP70_RS14680 () | 174015..174287 | - | 273 | WP_000246255.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| INP70_RS14685 () | 174439..174504 | + | 66 | Protein_163 | acetyltransferase | - |
| INP70_RS14690 () | 174840..176123 | + | 1284 | WP_000097716.1 | reverse transcriptase/maturase family protein | - |
| INP70_RS14695 () | 176307..176630 | + | 324 | WP_080099580.1 | DUF3709 domain-containing protein | - |
| INP70_RS14700 () | 176931..177302 | + | 372 | WP_001008376.1 | hypothetical protein | - |
| INP70_RS14705 () | 177619..177789 | + | 171 | Protein_167 | DUF645 family protein | - |
| INP70_RS14710 () | 177967..178248 | + | 282 | WP_002023414.1 | DUF1289 domain-containing protein | - |
| INP70_RS14715 () | 178505..179143 | + | 639 | WP_000230121.1 | HD domain-containing protein | - |
| INP70_RS14720 () | 179283..179963 | + | 681 | WP_000164130.1 | hypothetical protein | - |
| INP70_RS14725 () | 180032..180126 | + | 95 | Protein_171 | acetyltransferase | - |
| INP70_RS14730 () | 180121..181200 | + | 1080 | WP_000433659.1 | hypothetical protein | - |
| INP70_RS14735 () | 181494..181622 | + | 129 | WP_000947521.1 | DUF645 family protein | - |
| INP70_RS14740 () | 181638..181676 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| INP70_RS14745 () | 181880..182374 | + | 495 | WP_000664238.1 | hypothetical protein | - |
| INP70_RS14750 () | 182530..183237 | + | 708 | WP_032476912.1 | restriction endonuclease | - |
| INP70_RS14755 () | 183228..183344 | + | 117 | WP_080099589.1 | DUF3265 domain-containing protein | - |
| INP70_RS14760 () | 183352..183669 | - | 318 | WP_000077274.1 | CcdB family protein | - |
| INP70_RS14765 () | 183669..183914 | - | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| INP70_RS14770 () | 184111..184554 | + | 444 | WP_148519660.1 | hypothetical protein | - |
| INP70_RS14775 () | 184700..185176 | + | 477 | WP_001047173.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14780 () | 185470..185598 | + | 129 | WP_000947521.1 | DUF645 family protein | - |
| INP70_RS14785 () | 185614..185652 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| INP70_RS14790 () | 186395..186652 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| INP70_RS14795 () | 186640..186942 | + | 303 | WP_000229322.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INP70_RS14800 () | 187102..187488 | + | 387 | WP_001015082.1 | MmcQ/YjbR family DNA-binding protein | - |
| INP70_RS14805 () | 187665..187931 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| INP70_RS14810 () | 187918..188163 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| INP70_RS14815 () | 188304..188729 | + | 426 | WP_002023452.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14820 () | 188848..189129 | + | 282 | WP_002023460.1 | DUF1289 domain-containing protein | - |
| INP70_RS14825 () | 189542..189713 | + | 172 | Protein_191 | DUF645 family protein | - |
| INP70_RS14830 () | 189913..190191 | - | 279 | WP_000578475.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| INP70_RS14835 () | 190188..190472 | - | 285 | WP_000381184.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| INP70_RS14840 () | 190826..190954 | + | 129 | WP_000947521.1 | DUF645 family protein | - |
| INP70_RS14845 () | 190970..191008 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| INP70_RS14850 () | 191214..191525 | + | 312 | WP_000623749.1 | hypothetical protein | - |
| INP70_RS14855 () | 191653..191952 | - | 300 | WP_000802134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INP70_RS14860 () | 191949..192191 | - | 243 | WP_001107720.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| INP70_RS14865 () | 192991..193971 | + | 981 | WP_000738239.1 | DUF3883 domain-containing protein | - |
| INP70_RS14870 () | 194185..194475 | + | 291 | WP_148529225.1 | DUF3709 domain-containing protein | - |
| INP70_RS14875 () | 194837..195262 | + | 426 | WP_002023413.1 | hypothetical protein | - |
| INP70_RS14880 () | 195415..196095 | + | 681 | WP_000164130.1 | hypothetical protein | - |
| INP70_RS14885 () | 196257..196895 | + | 639 | WP_000230121.1 | HD domain-containing protein | - |
| INP70_RS14890 () | 197070..197306 | - | 237 | WP_000772125.1 | RNA-binding protein | - |
| INP70_RS14895 () | 197542..197823 | + | 282 | WP_002023414.1 | DUF1289 domain-containing protein | - |
| INP70_RS14900 () | 198052..198714 | + | 663 | WP_000084914.1 | Streptogramin A acetyltransferase | VF |
| INP70_RS14905 () | 198864..199247 | + | 384 | WP_001081314.1 | hypothetical protein | - |
| INP70_RS14910 () | 199390..199878 | + | 489 | WP_000424237.1 | hypothetical protein | - |
| INP70_RS14915 () | 200024..200562 | + | 539 | Protein_209 | hydrolase | - |
| INP70_RS14920 () | 200758..200928 | + | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| INP70_RS14925 () | 200928..201329 | + | 402 | WP_000351249.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| INP70_RS14930 () | 201299..201442 | + | 144 | WP_075042602.1 | DUF3265 domain-containing protein | - |
| INP70_RS14935 () | 201432..202067 | + | 636 | WP_050547144.1 | hypothetical protein | - |
| INP70_RS14940 () | 202209..202745 | + | 537 | WP_000644501.1 | nucleotidyltransferase family protein | - |
| INP70_RS14945 () | 202802..202885 | + | 84 | WP_080099571.1 | acetyltransferase | - |
| INP70_RS14950 () | 202898..203257 | + | 360 | Protein_216 | VOC family protein | - |
| INP70_RS14955 () | 203399..203833 | + | 435 | WP_000453958.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14960 () | 203923..204612 | + | 690 | WP_193836708.1 | FMN-binding negative transcriptional regulator | - |
| INP70_RS14965 () | 204828..205745 | + | 918 | WP_000186330.1 | alpha/beta hydrolase | - |
| INP70_RS14970 () | 205870..206385 | + | 516 | WP_000090010.1 | hypothetical protein | - |
| INP70_RS14975 () | 206520..206945 | + | 426 | WP_000403006.1 | GNAT family N-acetyltransferase | - |
| INP70_RS14980 () | 207093..207431 | + | 339 | WP_001033553.1 | hypothetical protein | - |
| INP70_RS14985 () | 207670..207906 | + | 237 | WP_000868838.1 | DUF645 family protein | - |
| INP70_RS14990 () | 208103..208702 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| INP70_RS14995 () | 208821..209309 | + | 489 | WP_000333524.1 | dual specificity protein phosphatase family protein | - |
| INP70_RS15000 () | 209606..209774 | + | 169 | Protein_226 | DUF645 family protein | - |
| INP70_RS15005 () | 209972..210391 | + | 420 | WP_193836675.1 | hypothetical protein | - |
| INP70_RS15010 () | 210546..210941 | + | 396 | WP_000870860.1 | DUF3465 domain-containing protein | - |
| INP70_RS15015 () | 211087..211602 | + | 516 | WP_000343784.1 | dTDP-fucosamine acetyltransferase | VF |
| INP70_RS15020 () | 212224..212583 | + | 360 | WP_001071522.1 | VOC family protein | - |
| INP70_RS15025 () | 212880..213059 | + | 180 | WP_050547145.1 | DUF645 family protein | - |
| INP70_RS15030 () | 213285..213788 | + | 504 | WP_001158950.1 | DinB family protein | - |
| INP70_RS15035 () | 213952..215943 | + | 1992 | WP_000739036.1 | AAA-like domain-containing protein | - |
| INP70_RS15040 () | 216088..216597 | + | 510 | WP_001033668.1 | ATPase AAA | - |
| INP70_RS15045 () | 216752..217147 | + | 396 | WP_000870860.1 | DUF3465 domain-containing protein | - |
| INP70_RS15050 () | 217316..217867 | + | 552 | WP_000821925.1 | hypothetical protein | - |
| INP70_RS15055 () | 218095..218484 | + | 390 | WP_000491261.1 | VOC family protein | - |
| INP70_RS15060 () | 218643..219623 | + | 981 | WP_000738239.1 | DUF3883 domain-containing protein | - |
| INP70_RS15065 () | 219917..220081 | + | 165 | WP_001902694.1 | DUF645 family protein | - |
| INP70_RS15070 () | 220287..220775 | + | 489 | WP_000110030.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15075 () | 220911..221336 | + | 426 | WP_000403004.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15080 () | 221490..222494 | + | 1005 | WP_000964930.1 | LD-carboxypeptidase | - |
| INP70_RS15085 () | 222611..222910 | - | 300 | WP_000802134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INP70_RS15090 () | 222907..223149 | - | 243 | WP_001107720.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| INP70_RS15095 () | 223944..224375 | + | 432 | WP_000795498.1 | hypothetical protein | - |
| INP70_RS15100 () | 224520..225034 | + | 515 | Protein_246 | GNAT family N-acetyltransferase | - |
| INP70_RS15105 () | 225035..225151 | + | 117 | WP_072612049.1 | DUF3265 domain-containing protein | - |
| INP70_RS15110 () | 225193..225969 | + | 777 | WP_000758202.1 | hypothetical protein | - |
| INP70_RS15115 () | 226112..226429 | - | 318 | WP_001180240.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INP70_RS15120 () | 226448..226690 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| INP70_RS15125 () | 227082..227261 | + | 180 | WP_032476891.1 | DUF645 family protein | - |
| INP70_RS15130 () | 227538..227828 | + | 291 | WP_148529225.1 | DUF3709 domain-containing protein | - |
| INP70_RS15135 () | 228115..228510 | + | 396 | WP_000870846.1 | DUF3465 domain-containing protein | - |
| INP70_RS15140 () | 228663..229151 | + | 489 | WP_000424237.1 | hypothetical protein | - |
| INP70_RS15145 () | 229135..229257 | + | 123 | WP_193836677.1 | DUF3265 domain-containing protein | - |
| INP70_RS15150 () | 229285..229761 | + | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15155 () | 230065..230236 | + | 172 | Protein_257 | DUF645 family protein | - |
| INP70_RS15160 () | 230437..230733 | + | 297 | WP_000617998.1 | Dabb family protein | - |
| INP70_RS15165 () | 230911..231324 | + | 414 | WP_000451552.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15170 () | 231401..231520 | + | 120 | WP_001891295.1 | hypothetical protein | - |
| INP70_RS15175 () | 231469..231750 | + | 282 | WP_002023460.1 | DUF1289 domain-containing protein | - |
| INP70_RS15180 () | 231916..232017 | + | 102 | WP_193836679.1 | acetyltransferase | - |
| INP70_RS15185 () | 232007..232393 | + | 387 | WP_000703159.1 | VOC family protein | - |
| INP70_RS15190 () | 232569..232835 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| INP70_RS15195 () | 232822..233067 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| INP70_RS15200 () | 233192..233587 | + | 396 | WP_000046948.1 | hypothetical protein | - |
| INP70_RS15205 () | 233737..234123 | + | 387 | WP_001015082.1 | MmcQ/YjbR family DNA-binding protein | - |
| INP70_RS15210 () | 234308..234712 | + | 405 | WP_001127262.1 | VOC family protein | - |
| INP70_RS15215 () | 234881..235462 | + | 582 | WP_000391145.1 | HD domain-containing protein | - |
| INP70_RS15220 () | 235764..235892 | + | 129 | WP_000947521.1 | DUF645 family protein | - |
| INP70_RS15225 () | 235908..235946 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| INP70_RS15230 () | 236235..236660 | + | 426 | WP_001891302.1 | hypothetical protein | - |
| INP70_RS15235 () | 237217..237684 | + | 468 | WP_001289285.1 | OsmC family protein | - |
| INP70_RS15240 () | 237832..238362 | + | 531 | WP_001123242.1 | hypothetical protein | - |
| INP70_RS15245 () | 238504..239037 | + | 534 | WP_000679873.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15250 () | 239197..239997 | + | 801 | WP_000453945.1 | PhzF family phenazine biosynthesis protein | - |
| INP70_RS15255 () | 240141..240629 | + | 489 | WP_000424243.1 | hypothetical protein | - |
| INP70_RS15260 () | 240685..240792 | + | 108 | WP_193836681.1 | acetyltransferase | - |
| INP70_RS15265 () | 241217..241732 | + | 516 | WP_000100089.1 | hypothetical protein | VF |
| INP70_RS15270 () | 242221..242487 | + | 267 | WP_002022569.1 | hypothetical protein | - |
| INP70_RS15275 () | 242624..243238 | + | 615 | WP_193836683.1 | DUF2971 domain-containing protein | - |
| INP70_RS15280 () | 243413..243649 | - | 237 | WP_000772131.1 | RNA-binding protein | - |
| INP70_RS15285 () | 243914..244189 | + | 276 | WP_000436062.1 | hypothetical protein | - |
| INP70_RS15290 () | 244366..244698 | + | 333 | WP_000843588.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| INP70_RS15295 () | 244685..244999 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| INP70_RS15300 () | 245303..245473 | + | 171 | Protein_286 | DUF645 family protein | - |
| INP70_RS15305 () | 245680..246027 | + | 348 | WP_000933405.1 | hypothetical protein | - |
| INP70_RS15310 () | 246147..246602 | + | 456 | WP_001245331.1 | GNAT family N-acetyltransferase | - |
| INP70_RS15315 () | 246809..247312 | + | 504 | WP_000734953.1 | hypothetical protein | - |
| INP70_RS15320 () | 247835..250621 | + | 2787 | WP_001131708.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|