MGE detailed information
MGE type: Genomic_island MGE length: 13240 bp
Accession: NZ_CP017979 Location: 4248154..4261393 Organism: Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Replicon: chromosome
Accession: NZ_CP017979 Location: 4248154..4261393 Organism: Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL257_RS22380 (BL257_20970) | 4244328..4245668 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| BL257_RS22390 (BL257_20975) | 4245936..4246916 | - | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| BL257_RS22405 (BL257_20985) | 4247438..4248157 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| BL257_RS22410 (BL257_20990) | 4248154..4248510 | - | 357 | Protein_4010 | Sensor histidine kinase DcuS | VF |
| BL257_RS22430 (BL257_21005) | 4249841..4251121 | - | 1281 | Protein_4012 | DcuS/MalK family sensor histidine kinase | - |
| BL257_RS22435 (BL257_21010) | 4251302..4251532 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| BL257_RS22440 (BL257_21015) | 4251544..4251816 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| BL257_RS22450 (BL257_21020) | 4252043..4252339 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BL257_RS22455 (BL257_21025) | 4252367..4252540 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BL257_RS22460 (BL257_21030) | 4252659..4254176 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| BL257_RS22465 (BL257_21035) | 4254413..4255870 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| BL257_RS22470 (BL257_21040) | 4255929..4258076 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| BL257_RS22475 (BL257_21045) | 4258156..4259490 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BL257_RS22480 (BL257_21050) | 4259855..4261393 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BL257_RS22495 (BL257_21060) | 4262192..4262767 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| BL257_RS22500 (BL257_21065) | 4262804..4264501 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| BL257_RS22505 (BL257_21070) | 4264477..4264815 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| BL257_RS22510 (BL257_21075) | 4264931..4266232 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli LY180 | Genomic island | TA30108 | NC_022364 | 4543610..4552960 | 0.009 | |
| Escherichia coli KLY | Genomic island | TA47529 | NZ_CP008801 | 4429443..4438793 | 0.009 | |
| Escherichia coli K-12 strain K-12 MG1655 | Genomic island | TA52568 | NZ_CP010442 | 468745..478095 | 0.009 | |
| Escherichia coli K-12 strain K-12 MG1655 | Genomic island | TA52692 | NZ_CP010445 | 468745..478095 | 0.009 | |
| Escherichia coli strain HST04 | Genomic island | TA59653 | NZ_CP013952 | 1527513..1536380 | 0.01 | |
| Escherichia coli K-12 strain K-12 DHB4 | Genomic island | TA60547 | NZ_CP014270 | 4257785..4267135 | 0.009 | |
| Escherichia coli strain MRSN346595 | Genomic island | TA68748 | NZ_CP018109 | 4531147..4540497 | 0.009 | |
| Escherichia coli strain JME66 | Genomic island | TA136111 | NZ_CP042844 | 416658..426008 | 0.009 | |
| Escherichia coli O16:H48 strain PG20180171 | Genomic island | TA137446 | NZ_CP043185 | 3083131..3092481 | 0.009 | |
| Escherichia coli strain SL112 | Genomic island | TA138855 | NZ_CP043486 | 4498171..4507521 | 0.009 | |
| Escherichia coli strain NEB10-beta | Genomic island | TA157120 | NZ_CP053604 | 4432596..4441946 | 0.009 | |
| Escherichia coli strain IGC_EcoliInv_1.1 | Genomic island | TA160066 | NZ_CP054665 | 4404375..4413725 | 0.009 | |
| Escherichia coli strain AML001_ev02 | Genomic island | TA173709 | NZ_CP062240 | 4343600..4352950 | 0.009 | |
| Escherichia coli strain BS74R-D | Genomic island | TA177917 | NZ_CP063332 | 3418575..3427925 | 0.009 | |
| Escherichia coli strain CY598 | Genomic island | TA187116 | NZ_CP068283 | 4400356..4409706 | 0.009 | |
| Escherichia coli strain K1508 | Genomic island | TA197279 | NZ_CP072054 | 4237929..4247279 | 0.009 | |
| Escherichia coli strain PM7 | Genomic island | TA201001 | NZ_CP073996 | 3392987..3402337 | 0.009 | |
| Escherichia coli strain SF10 | Genomic island | TA209982 | NZ_CP079767 | 2994163..3003513 | 0.009 | |
| Escherichia coli strain HL15 | Genomic island | TA210007 | NZ_CP079770 | 2999352..3008702 | 0.009 | |
| Escherichia coli strain KMS2001 | Genomic island | TA210482 | NZ_CP079992 | 602945..612295 | 0.009 | |
| Escherichia coli strain BM28 | Genomic island | TA253589 | NZ_CP102380 | 4229976..4239326 | 0.009 | |
| Escherichia coli strain USDA-ARS-USMARC-51408 | Genomic island | TA257217 | NZ_CP104114 | 445660..455010 | 0.009 | |
| Escherichia coli strain K-12 substr. HMS174 | Genomic island | TA285413 | NZ_LM993812 | 4295792..4305142 | 0.009 | |
| Escherichia coli isolate 103 | Genomic island | TA293388 | NZ_LT615378 | 4349058..4358408 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.009 |