MGE detailed information
MGE type: Integron MGE length: 53129 bp
Accession: NZ_AP024552 Location: 672778..725906 Organism: Vibrio cholerae strain IDH-02387 Replicon: chromosome
Accession: NZ_AP024552 Location: 672778..725906 Organism: Vibrio cholerae strain IDH-02387 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J81_RS17065 | 668337..671114 | - | 2778 | WP_000509636.1 | alkaline phosphatase family protein | - |
| K6J81_RS17075 | 673265..673678 | - | 414 | WP_000049420.1 | VOC family protein | - |
| K6J81_RS17080 | 673862..674377 | - | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| K6J81_RS17085 | 674571..674855 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J81_RS17090 | 674852..675130 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K6J81_RS17095 | 675269..675664 | - | 396 | WP_001000867.1 | hypothetical protein | - |
| K6J81_RS17100 | 675915..676040 | - | 126 | WP_001905700.1 | DUF645 family protein | - |
| K6J81_RS17105 | 676339..676860 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| K6J81_RS17110 | 676854..677123 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| K6J81_RS17115 | 677190..677258 | - | 69 | Protein_581 | acetyltransferase | - |
| K6J81_RS17120 | 677315..677914 | - | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| K6J81_RS17125 | 678064..678936 | - | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| K6J81_RS17130 | 679111..679332 | - | 222 | Protein_584 | GNAT family N-acetyltransferase | - |
| K6J81_RS17135 | 679393..679830 | - | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| K6J81_RS17140 | 679949..680158 | - | 210 | Protein_586 | GNAT family N-acetyltransferase | - |
| K6J81_RS17145 | 680294..680683 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| K6J81_RS17150 | 680840..681757 | - | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| K6J81_RS17155 | 681991..682293 | - | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17160 | 682281..682538 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J81_RS19225 | 682620..682730 | - | 111 | WP_086010065.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17165 | 682740..683273 | - | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K6J81_RS19230 | 683270..683539 | - | 270 | WP_000179600.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K6J81_RS17175 | 683762..684133 | - | 372 | WP_001164080.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| K6J81_RS17180 | 684274..684561 | - | 288 | WP_000426470.1 | hypothetical protein | - |
| K6J81_RS17185 | 684713..685381 | - | 669 | WP_000043871.1 | hypothetical protein | - |
| K6J81_RS19235 | 685398..685460 | - | 63 | Protein_597 | acetyltransferase | - |
| K6J81_RS17190 | 685612..685884 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | - |
| K6J81_RS17195 | 685881..686376 | + | 496 | Protein_599 | GNAT family N-acetyltransferase | - |
| K6J81_RS19240 | 686393..686461 | - | 69 | Protein_600 | acetyltransferase | - |
| K6J81_RS17200 | 686578..686682 | - | 105 | WP_228840819.1 | DUF645 family protein | - |
| K6J81_RS19245 | 686873..686995 | - | 123 | Protein_602 | acetyltransferase | - |
| K6J81_RS17205 | 687052..687507 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| K6J81_RS17210 | 687635..687922 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17215 | 687912..688163 | - | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J81_RS17220 | 688377..688790 | - | 414 | WP_000049417.1 | VOC family protein | - |
| K6J81_RS19250 | 688865..688975 | - | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17225 | 688978..689379 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K6J81_RS19255 | 689379..689549 | - | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| K6J81_RS19260 | 689673..690071 | - | 399 | Protein_610 | GNAT family N-acetyltransferase | - |
| K6J81_RS17235 | 690208..690514 | - | 307 | Protein_611 | Streptogramin A acetyltransferase | VF |
| K6J81_RS17240 | 690582..691562 | + | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| K6J81_RS17245 | 691687..691842 | - | 156 | WP_000751734.1 | hypothetical protein | - |
| K6J81_RS17250 | 692010..692444 | - | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| K6J81_RS17255 | 692581..692895 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| K6J81_RS17260 | 692882..693214 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17265 | 693555..693782 | - | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| K6J81_RS17270 | 693731..693844 | - | 114 | WP_001889158.1 | hypothetical protein | - |
| K6J81_RS17275 | 694010..694231 | - | 222 | WP_032468461.1 | DUF1289 domain-containing protein | - |
| K6J81_RS17280 | 694240..694354 | - | 115 | Protein_620 | acetyltransferase | - |
| K6J81_RS17285 | 694411..694788 | - | 378 | WP_000411109.1 | hypothetical protein | - |
| K6J81_RS17290 | 694959..695312 | - | 354 | WP_080032710.1 | pullulanase | - |
| K6J81_RS17295 | 695403..695789 | - | 387 | WP_000703163.1 | VOC family protein | - |
| K6J81_RS17300 | 695998..696130 | - | 133 | Protein_624 | DUF645 family protein | - |
| K6J81_RS19265 | 696121..696246 | - | 126 | WP_080360924.1 | general secretion pathway protein GspH | - |
| K6J81_RS17305 | 696487..696756 | - | 270 | WP_001198131.1 | hypothetical protein | - |
| K6J81_RS17310 | 697116..697313 | - | 198 | WP_001894451.1 | DUF3709 domain-containing protein | - |
| K6J81_RS17315 | 697570..697773 | - | 204 | WP_001911745.1 | hypothetical protein | - |
| K6J81_RS17320 | 698060..698611 | - | 552 | WP_000821930.1 | hypothetical protein | - |
| K6J81_RS17325 | 698767..699624 | - | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| K6J81_RS17330 | 699824..699994 | - | 171 | WP_001882300.1 | DUF645 family protein | - |
| K6J81_RS17335 | 700298..700876 | - | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| K6J81_RS19270 | 700888..700956 | - | 69 | Protein_633 | acetyltransferase | - |
| K6J81_RS17340 | 701127..702112 | + | 986 | Protein_634 | Sulfate-binding protein | VF |
| K6J81_RS17345 | 702495..702959 | + | 465 | WP_000140244.1 | hypothetical protein | - |
| K6J81_RS17350 | 703059..703268 | - | 210 | Protein_636 | hypothetical protein | - |
| K6J81_RS17355 | 703399..705009 | + | 1611 | WP_002041336.1 | IS1634 family transposase ISSpu7 | Transposase |
| K6J81_RS17360 | 705030..705224 | - | 195 | Protein_638 | hypothetical protein | - |
| K6J81_RS17365 | 705380..705880 | - | 501 | WP_000789723.1 | hypothetical protein | - |
| K6J81_RS17370 | 706018..706548 | - | 531 | WP_000415563.1 | hypothetical protein | - |
| K6J81_RS17375 | 706699..707094 | - | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| K6J81_RS17380 | 707302..707727 | - | 426 | WP_000415752.1 | hypothetical protein | - |
| K6J81_RS17385 | 707999..708652 | - | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| K6J81_RS17390 | 709223..709471 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J81_RS17395 | 709461..709751 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17400 | 709887..710348 | - | 462 | WP_001911752.1 | lipocalin family protein | - |
| K6J81_RS17405 | 710539..711015 | - | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| K6J81_RS19275 | 711043..711153 | - | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17410 | 711150..712079 | - | 930 | WP_000335802.1 | hypothetical protein | - |
| K6J81_RS17415 | 712199..712645 | - | 447 | WP_000128977.1 | hypothetical protein | - |
| K6J81_RS17420 | 712798..713802 | - | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| K6J81_RS19280 | 713990..714106 | - | 117 | WP_001889170.1 | hypothetical protein | - |
| K6J81_RS17430 | 714069..714194 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| K6J81_RS19285 | 714222..714332 | - | 111 | Protein_654 | acetyltransferase | - |
| K6J81_RS19290 | 714371..714481 | - | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17435 | 714478..714795 | - | 318 | WP_001232701.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| K6J81_RS17440 | 714806..715093 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS19295 | 715134..715247 | - | 114 | WP_001894955.1 | hypothetical protein | - |
| K6J81_RS17445 | 715360..715540 | - | 181 | Protein_659 | DUF645 family protein | - |
| K6J81_RS17450 | 715965..716198 | - | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| K6J81_RS19300 | 716219..716412 | - | 194 | Protein_661 | hypothetical protein | - |
| K6J81_RS17455 | 716601..716819 | - | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| K6J81_RS19305 | 716831..717040 | - | 210 | WP_001900246.1 | DUF3709 domain-containing protein | - |
| K6J81_RS17460 | 717129..717782 | - | 654 | WP_000226874.1 | hypothetical protein | - |
| K6J81_RS17465 | 717839..718348 | - | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| K6J81_RS17470 | 718590..718832 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J81_RS17475 | 718851..719168 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS19310 | 719362..719514 | - | 153 | Protein_668 | DUF645 family protein | - |
| K6J81_RS19315 | 719575..719750 | - | 176 | Protein_669 | acetyltransferase | - |
| K6J81_RS17485 | 719813..720106 | - | 294 | WP_125460920.1 | hypothetical protein | - |
| K6J81_RS17490 | 720253..720600 | - | 348 | WP_000933409.1 | hypothetical protein | - |
| K6J81_RS17495 | 720749..721174 | - | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| K6J81_RS19320 | 721333..721443 | - | 111 | WP_223804330.1 | Tfp pilus assembly protein | - |
| K6J81_RS19325 | 721433..721495 | - | 63 | Protein_674 | DUF645 family protein | - |
| K6J81_RS17505 | 721846..722382 | - | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| K6J81_RS17510 | 722526..722921 | - | 396 | WP_000046953.1 | DUF6404 family protein | - |
| K6J81_RS17515 | 723098..723217 | - | 120 | WP_001900954.1 | DUF645 family protein | - |
| K6J81_RS19330 | 723340..723483 | - | 144 | Protein_678 | acetyltransferase | - |
| K6J81_RS17520 | 723582..723938 | - | 357 | WP_001094969.1 | DUF6404 family protein | - |
| K6J81_RS17525 | 724230..724508 | - | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| K6J81_RS19335 | 724626..724676 | - | 51 | WP_228779804.1 | hypothetical protein | - |
| K6J81_RS17535 | 724733..725740 | - | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| K6J81_RS17540 | 726158..726400 | + | 243 | Protein_683 | transposase | - |
| K6J81_RS17545 | 726533..728143 | + | 1611 | WP_221291564.1 | IS1634-like element ISSpu7 family transposase | - |
| K6J81_RS17550 | 728162..729102 | + | 941 | Protein_685 | IS3-like element ISVch4 family transposase | - |
| K6J81_RS17555 | 729099..729794 | + | 696 | WP_000213836.1 | hypothetical protein | - |
| K6J81_RS17560 | 729855..730361 | - | 507 | WP_001921103.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|