MGE detailed information
MGE type: Genomic_island MGE length: 32762 bp
Accession: NC_003098 Location: 920239..953000 Organism: Streptococcus pneumoniae R6 Replicon: chromosome
Accession: NC_003098 Location: 920239..953000 Organism: Streptococcus pneumoniae R6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPR_RS04655 (spr0930) | 915523..916137 | + | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
| SPR_RS04660 (spr0931) | 916211..917185 | + | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| SPR_RS04665 (spr0932) | 917259..918890 | + | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SPR_RS04670 (spr0932a) | 919104..919382 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| SPR_RS04675 (spr0933) | 919628..919846 | + | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| SPR_RS04680 (spr0934) | 920239..921264 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SPR_RS04685 (spr0935) | 921254..922261 | + | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SPR_RS04690 (spr0936) | 922261..923268 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| SPR_RS04695 (spr0938) | 923268..924062 | + | 795 | WP_000677519.1 | Petrobactin import ATP-binding protein FpuD | VF |
| SPR_RS04700 | 924450..924839 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| SPR_RS04705 | 924805..925119 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| SPR_RS04710 (spr0941) | 925803..925964 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| SPR_RS04715 (spr0942) | 926056..927735 | + | 1680 | WP_000031832.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| SPR_RS04720 (spr0943) | 928003..928569 | + | 567 | WP_000234985.1 | hypothetical protein | - |
| SPR_RS04725 (spr0944) | 928891..929079 | + | 189 | WP_000179772.1 | hypothetical protein | - |
| SPR_RS04730 (spr0945) | 929141..929956 | + | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| SPR_RS04735 (spr0946) | 929956..930810 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| SPR_RS04740 (spr0947) | 930922..931806 | + | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| SPR_RS04745 (spr0948) | 931969..933708 | + | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| SPR_RS04750 (spr0949) | 933794..934111 | + | 318 | WP_000995820.1 | hypothetical protein | - |
| SPR_RS04755 (spr0950) | 934157..934438 | + | 282 | WP_000266233.1 | hypothetical protein | - |
| SPR_RS04760 (spr0951) | 934883..935359 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SPR_RS04765 (spr0952) | 935359..936120 | + | 762 | WP_000405357.1 | zeta toxin family protein | Toxin Detail |
| SPR_RS04775 (spr0955) | 938136..938495 | + | 360 | WP_000529543.1 | hypothetical protein | - |
| SPR_RS04780 (spr0956) | 938505..938834 | + | 330 | WP_000263037.1 | MobC family plasmid mobilization relaxosome protein | - |
| SPR_RS04800 (spr0960) | 940787..941641 | - | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| SPR_RS04805 | 941722..941793 | + | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| SPR_RS04810 (spr0961) | 941893..943188 | + | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| SPR_RS04815 (spr0962) | 943172..943798 | + | 627 | WP_000862562.1 | PIG-L family deacetylase | - |
| SPR_RS04820 (spr0963) | 943808..944590 | + | 783 | WP_000809423.1 | sugar phosphate isomerase/epimerase | - |
| SPR_RS04825 (spr0964) | 944613..946505 | + | 1893 | WP_000710678.1 | hypothetical protein | - |
| SPR_RS04830 (spr0965) | 946534..947640 | + | 1107 | WP_000444113.1 | hypothetical protein | - |
| SPR_RS04835 (spr0966) | 947648..948958 | + | 1311 | WP_000423517.1 | AMP-binding protein | - |
| SPR_RS04840 (spr0967) | 948960..950183 | + | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| SPR_RS04845 (spr0968) | 950173..951123 | + | 951 | WP_000389975.1 | hypothetical protein | - |
| SPR_RS04850 (spr0969) | 951138..952337 | + | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| SPR_RS04855 (spr0970) | 952356..953000 | + | 645 | WP_000270072.1 | Putative acetyltransferase EpsM | VF |
| SPR_RS04860 (spr0971) | 953383..954594 | + | 1212 | WP_000687010.1 | MFS transporter | - |
| SPR_RS04865 (spr0972) | 955253..955474 | + | 222 | WP_000286251.1 | helix-turn-helix domain-containing protein | - |
| SPR_RS04875 (spr0973) | 956376..957605 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae D39 | Genomic island | TA21724 | NC_008533 | 927771..960532 | 0 | |
| Streptococcus pneumoniae strain D39V | Genomic island | TA99264 | NZ_CP027540 | 1002494..1037461 | 0.001 | |
| Streptococcus pneumoniae strain TVO_D39 | Genomic island | TA117437 | NZ_CP035238 | 1002490..1037454 | 0.001 | |
| Streptococcus pneumoniae strain R6CIB17 | Genomic island | TA123195 | NZ_CP038808 | 920241..953002 | 0 | |
| Streptococcus pneumoniae strain D39_P0 | Genomic island | TA172266 | NZ_CP061208 | 1002451..1037417 | 0.001 | |
| Streptococcus pneumoniae strain R36A | Genomic island | TA210365 | NZ_CP079922 | 921610..954371 | 0 | |
| Streptococcus pneumoniae strain Rx1 | Genomic island | TA210369 | NZ_CP079923 | 916149..948908 | 0 | |
| Streptococcus pneumoniae strain NCTC7466 | Genomic island | TA292449 | NZ_LS483374 | 1002494..1037460 | 0.001 | |
| Streptococcus pneumoniae strain NCTC13276 | Genomic island | TA292476 | NZ_LS483390 | 921609..954370 | 0 |