Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | pezAT/zeta-couple_hipB |
Location | 1020968..1022205 | Replicon | chromosome |
Accession | NZ_LS483374 | ||
Organism | Streptococcus pneumoniae strain NCTC7466 |
Toxin (Protein)
Gene name | pezT | Uniprot ID | R4H7C0 |
Locus tag | DQM66_RS05335 | Protein ID | WP_000405357.1 |
Coordinates | 1020968..1021729 (-) | Length | 254 a.a. |
Antitoxin (Protein)
Gene name | pezA | Uniprot ID | B6ZCC4 |
Locus tag | DQM66_RS05340 | Protein ID | WP_000579612.1 |
Coordinates | 1021729..1022205 (-) | Length | 159 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
DQM66_RS11190 | 1016346..1018231 | - | 1886 | Protein_983 | relaxase/mobilization nuclease domain-containing protein | - |
DQM66_RS05315 | 1018254..1018583 | - | 330 | WP_000263037.1 | MobC family plasmid mobilization relaxosome protein | - |
DQM66_RS05320 | 1018593..1018952 | - | 360 | WP_000529543.1 | hypothetical protein | - |
DQM66_RS05330 | 1019784..1020940 | - | 1157 | Protein_986 | hypothetical protein | - |
DQM66_RS05335 | 1020968..1021729 | - | 762 | WP_000405357.1 | zeta toxin family protein | Toxin |
DQM66_RS05340 | 1021729..1022205 | - | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin |
DQM66_RS05345 | 1022650..1022931 | - | 282 | WP_000266233.1 | hypothetical protein | - |
DQM66_RS05350 | 1022977..1023294 | - | 318 | WP_000995820.1 | hypothetical protein | - |
DQM66_RS05355 | 1023380..1025119 | - | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
DQM66_RS05360 | 1025282..1026166 | - | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
DQM66_RS05365 | 1026278..1027132 | - | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Genomic island | - | - | 1002494..1037460 | 34966 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 254 a.a. Molecular weight: 29044.10 Da Isoelectric Point: 7.1307
>T292449 WP_000405357.1 NZ_LS483374:c1021729-1020968 [Streptococcus pneumoniae]
MEIQDYTDSEFKHALARNLRSLTRGKKSSKQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQ
EYGKDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTIDVPKKTAQLLKNKGYEVQLALIATKPELSYLSTLIRYEE
LYIINPNQARATPKEHHDFIVNHLVDNTRKLEELAIFERIQIYQRDRSCVYDSKENTTSAADVLQELLFGEWSQVEKEML
QVGEKRLNELLEK
MEIQDYTDSEFKHALARNLRSLTRGKKSSKQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQ
EYGKDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTIDVPKKTAQLLKNKGYEVQLALIATKPELSYLSTLIRYEE
LYIINPNQARATPKEHHDFIVNHLVDNTRKLEELAIFERIQIYQRDRSCVYDSKENTTSAADVLQELLFGEWSQVEKEML
QVGEKRLNELLEK
Download Length: 762 bp
Antitoxin
Download Length: 159 a.a. Molecular weight: 18245.68 Da Isoelectric Point: 4.4188
>AT292449 WP_000579612.1 NZ_LS483374:c1022205-1021729 [Streptococcus pneumoniae]
MIGKNIKSLRKTHDLTQPEFARIIGISRNSLSRYENGTSSVSTELIDIICQKFNVSYVDIVGEDKMLNPVEDYELTLKIE
IVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTNIYLVETFDEIERYSGYLDGIERMLEISEKRMVA
MIGKNIKSLRKTHDLTQPEFARIIGISRNSLSRYENGTSSVSTELIDIICQKFNVSYVDIVGEDKMLNPVEDYELTLKIE
IVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTNIYLVETFDEIERYSGYLDGIERMLEISEKRMVA
Download Length: 477 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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