MGE detailed information
MGE type: Genomic_island MGE length: 16377 bp
Accession: CP009789 Location: 4505469..4521845 Organism: Escherichia coli K-12 strain ER3413 Replicon: chromosome
Accession: CP009789 Location: 4505469..4521845 Organism: Escherichia coli K-12 strain ER3413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ER3413_4452 | 4501160..4502473 | - | 1314 | AIZ54118.1 | KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component | - |
| ER3413_4453 | 4502485..4502763 | - | 279 | AIZ54119.1 | putative enzyme IIB component of PTS | - |
| ER3413_4454 | 4502760..4503881 | - | 1122 | AIZ54120.1 | KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain | - |
| ER3413_4455 | 4504667..4505413 | - | 747 | AIZ54121.1 | KpLE2 phage-like element; predicted methyltransferase | - |
| ER3413_4456 | 4505469..4506014 | - | 546 | AIZ54122.1 | KpLE2 phage-like element; predicted acetyltransferase | Antitoxin Detail |
| ER3413_4457 | 4506026..4506283 | - | 258 | AIZ54123.1 | hypothetical protein | Toxin Detail |
| ER3413_4461 | 4508844..4509824 | - | 981 | AIZ54125.1 | 9-O-acetyl N-acetylneuraminic acid esterase | - |
| ER3413_4462 | 4509889..4510995 | - | 1107 | AIZ54126.1 | N-acetylneuraminic acid mutarotase | - |
| ER3413_4463 | 4511015..4511731 | - | 717 | AIZ54127.1 | N-acetylnuraminic acid outer membrane channel protein | - |
| ER3413_4464 | 4511787..4512995 | - | 1209 | AIZ54128.1 | IS4 family transposase IS10R | Transposase |
| ER3413_4465 | 4513125..4514333 | - | 1209 | AIZ54129.1 | IS4 family transposase IS10R | Transposase |
| ER3413_4466 | 4514437..4516449 | - | 2013 | Protein_4039 | - | - |
| ER3413_4467 | 4516703..4517197 | - | 495 | AIZ54130.1 | hypothetical protein | - |
| ER3413_4468 | 4517246..4517983 | - | 738 | AIZ54131.1 | IS21 family transposase ISSme2 | Transposase |
| ER3413_4469 | 4517986..4518525 | - | 540 | AIZ54132.1 | DNA biosynthesis protein (primosomal protein I) | - |
| ER3413_4470 | 4518632..4519105 | - | 474 | AIZ54134.1 | conserved inner membrane protein | - |
| ER3413_4471 | 4519096..4519866 | - | 771 | AIZ54135.1 | inner membrane protein, H-NS-repressed, DUF1212 family | - |
| ER3413_4472 | 4520485..4521210 | + | 726 | AIZ54136.1 | Putative transcription factor YjjQ | VF |
| ER3413_4473 | 4521168..4521845 | + | 678 | AIZ54137.1 | Transcriptional activator protein BglJ | VF |
| ER3413_4474 | 4521883..4522671 | - | 789 | AIZ54138.1 | ferric iron reductase involved in ferric hydroximate transport | - |
| ER3413_4475 | 4522812..4523048 | + | 237 | AIZ54139.1 | hypothetical protein | - |
| ER3413_4479 | 4523677..4524708 | - | 1032 | AIZ54140.1 | 16S rRNA m(2)G1207 methyltransferase, SAM-dependent | - |
| ER3413_4480 | 4524811..4525224 | + | 414 | AIZ54142.1 | DNA polymerase III, psi subunit | - |
| ER3413_4481 | 4525193..4525639 | + | 447 | AIZ54143.1 | ribosomal-protein-S18-alanine N-acetyltransferase | - |
| ER3413_4482 | 4525654..4526331 | + | 678 | AIZ54144.1 | dUMP phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0.002 | |
| Escherichia coli ER2796 strain K-12 ER2796 | Genomic island | TA49384 | NZ_CP009644 | 4505471..4521847 | 0 | |
| Escherichia coli K-12 strain K-12 ER3413 | Genomic island | TA49811 | NZ_CP009789 | 4505469..4521845 | 0 | |
| Escherichia coli strain NEB10-beta | Genomic island | TA157122 | NZ_CP053604 | 4614697..4630949 | 0.002 | |
| Escherichia coli strain HE_100-10 | Genomic island | TA262657 | NZ_CP110014 | 4635171..4651422 | 0.002 | |
| Escherichia coli strain HE_150 | Genomic island | TA262683 | NZ_CP110015 | 4635183..4651434 | 0.002 | |
| Escherichia coli strain HE_100 | Genomic island | TA262709 | NZ_CP110016 | 4635178..4651429 | 0.002 | |
| Escherichia coli strain HE_50 | Genomic island | TA262735 | NZ_CP110017 | 4635185..4651437 | 0.002 | |
| Escherichia coli strain DH10B | Genomic island | TA262761 | NZ_CP110018 | 4634420..4650672 | 0.002 | |
| Escherichia coli strain CM5 | Genomic island | TA266936 | NZ_CP114892 | 3767291..3783543 | 0.002 | |
| Escherichia coli strain CM56 | Genomic island | TA266992 | NZ_CP114895 | 611516..627768 | 0.002 | |
| Escherichia coli strain CM93 | Genomic island | TA267037 | NZ_CP114896 | 3999698..4015950 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0.002 |