Detailed information of component protein


Summary

Component ID T6CP259589
Component protein type TssM
T6SS ID (Type) T6SS17507 experimental (Type i4a)
Strain Cupriavidus pinatubonensis JMP134
Replicon chromosome I
Sequence Protein sequence (1383 a.a.); Nucleotide sequence (4149 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) REUT_RS08635
Coordinate (Strand) 1850094..1854242 (-)
NCBI ID WP_011297878.1
RefSeq NC_007347
Uniprot ID Q470V3_CUPPJ
KEGG ID reu:Reut_A1715
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
IcmF-related_N PF14331.8 2.9e-62 139..417
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Inside 1-6 MLTSNL
Transmembrane helix 7-29 FLISIGVLTLVAFAVLGLVLYYA
Outside 30-1382 AQGGRAKPAGERKIVRLRTDTLRAAFRQAIELIEGNLVSRAERYNIPWIMVLNEGDDARPLPIAQSGVSSALGTDAANAAATQGISWHFFDRGVVIDINAGYLGSPDDDGDEKPWDEFLGLCRNYRPQRPFDSVVITVPAAKLLADDTDAQLELVRRAKLVHRRLWLAQNRFAVRFAVYVVVTGAEALPGFAQFARDLPEPMRASMLGWSSPYDLSATYQSDWVEAALSSIVRSVSDSAAELLAAAPPDLDARQLLLLPARIEAMRAQLQRYIDELLRPSAYHEPFFFRGVYLTGDSGELAAQGLSAVPRGETEPEREDSESLPERIEPVLDAGESSVAGGTHLTELMLQPAFLRDLFDKKIFLEYGLTRPSRSQHLARPVVHRALRWGGVALLGLWGVGLAVNTWQLGQRKAELLAALGGLRNASQQRAQAEQAGQELPPEWYRRQTLGLIDMNQRLMAQSTWSVFMPGSWSPFDDLDERMREHFQREFGKVALPTIHREMLARVSQLTGVVRDPSTAELVIGDDCAVPAGARGDAGGPRTLAIEDLPEMRALQQYVGAVDQFDAALSALQRLENGGEGRSEALRTVVRYALGAELHGDVSGTLSYFRTDGGAGRGAHAMVGSAPAVGPAQVVQPLRCSYDKGARQLEARLFSDNALLVAERSVRDGLEALSGAGTDFSHVLGDYRGIVAGIGTQQELLAGGKAGWLRQPQFAPGPAYERLLAQATRSRLLGEDLVARQRERSRAGFAALREELAQRFSGPEAGIVWQDKEGRYAVAPERLALRDRLAALVSQPFMTAPRDLPLPALGARTVVNWDRQQLDQAMTLAETRKRFVGEGLADLPGASRDTVARSIDAQFTRLMMDQVAAAAVVAPAGAAGSAGSTGSDSAAFEAALGRLVKIKTALAEMHATARVEDLDALISRDALAHLRAVDEALQQSELYAIRQSGGDARSRSPMLAAFGLSDAAGLGPYLDQQSGRALALGREASLYLGVLNSGDAASPLAQRWLAITRDLERYRLKNPNSQLLMLEQFIQGMAADGGRGGCFGRFASRLPRGADDYFATLQARVYEGLLARCAQGYFAELQRQWDGFSAIFNERVAGHAPFGAAVQGGPNPADQTMADYGELGRVLKRYEQVSTVYREPRGDGPLKGLSAGMPVHQFMDNFEQVRTLLSPLYPADDSTPGGYDINVDFRVNRSAELAGNQIIDWSLSVGAQNLSQQEAPRSLRWEYGMPVMLTLRFAKDSPLQATADPRQRALSTDGRSMTWRFADPWALISFIGRQRVADPSVRAEGAASLLRFDFPLAPATPADLTAVPKQGQGRVFLRLALTPAGKKTPLPWPRSFPTRAPDWNPL


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9920 - -


  Protein sequence: 1383 a.a.    

>T6CP259589 NC_007347:c1854242-1850094 [Cupriavidus pinatubonensis JMP134] [TssM]
MLTSNLFLISIGVLTLVAFAVLGLVLYYAAQGGRAKPAGERKIVRLRTDTLRAAFRQAIELIEGNLVSRAERYNIPWIMV
LNEGDDARPLPIAQSGVSSALGTDAANAAATQGISWHFFDRGVVIDINAGYLGSPDDDGDEKPWDEFLGLCRNYRPQRPF
DSVVITVPAAKLLADDTDAQLELVRRAKLVHRRLWLAQNRFAVRFAVYVVVTGAEALPGFAQFARDLPEPMRASMLGWSS
PYDLSATYQSDWVEAALSSIVRSVSDSAAELLAAAPPDLDARQLLLLPARIEAMRAQLQRYIDELLRPSAYHEPFFFRGV
YLTGDSGELAAQGLSAVPRGETEPEREDSESLPERIEPVLDAGESSVAGGTHLTELMLQPAFLRDLFDKKIFLEYGLTRP
SRSQHLARPVVHRALRWGGVALLGLWGVGLAVNTWQLGQRKAELLAALGGLRNASQQRAQAEQAGQELPPEWYRRQTLGL
IDMNQRLMAQSTWSVFMPGSWSPFDDLDERMREHFQREFGKVALPTIHREMLARVSQLTGVVRDPSTAELVIGDDCAVPA
GARGDAGGPRTLAIEDLPEMRALQQYVGAVDQFDAALSALQRLENGGEGRSEALRTVVRYALGAELHGDVSGTLSYFRTD
GGAGRGAHAMVGSAPAVGPAQVVQPLRCSYDKGARQLEARLFSDNALLVAERSVRDGLEALSGAGTDFSHVLGDYRGIVA
GIGTQQELLAGGKAGWLRQPQFAPGPAYERLLAQATRSRLLGEDLVARQRERSRAGFAALREELAQRFSGPEAGIVWQDK
EGRYAVAPERLALRDRLAALVSQPFMTAPRDLPLPALGARTVVNWDRQQLDQAMTLAETRKRFVGEGLADLPGASRDTVA
RSIDAQFTRLMMDQVAAAAVVAPAGAAGSAGSTGSDSAAFEAALGRLVKIKTALAEMHATARVEDLDALISRDALAHLRA
VDEALQQSELYAIRQSGGDARSRSPMLAAFGLSDAAGLGPYLDQQSGRALALGREASLYLGVLNSGDAASPLAQRWLAIT
RDLERYRLKNPNSQLLMLEQFIQGMAADGGRGGCFGRFASRLPRGADDYFATLQARVYEGLLARCAQGYFAELQRQWDGF
SAIFNERVAGHAPFGAAVQGGPNPADQTMADYGELGRVLKRYEQVSTVYREPRGDGPLKGLSAGMPVHQFMDNFEQVRTL
LSPLYPADDSTPGGYDINVDFRVNRSAELAGNQIIDWSLSVGAQNLSQQEAPRSLRWEYGMPVMLTLRFAKDSPLQATAD
PRQRALSTDGRSMTWRFADPWALISFIGRQRVADPSVRAEGAASLLRFDFPLAPATPADLTAVPKQGQGRVFLRLALTPA
GKKTPLPWPRSFPTRAPDWNPL*

  Nucleotide sequence: 4149 bp    

>T6CP259589 NC_007347:c1854242-1850094 [Cupriavidus pinatubonensis JMP134] [TssM]
ATGCTGACCAGTAATCTCTTCCTGATCTCGATCGGCGTGCTGACGCTGGTCGCATTCGCCGTGCTTGGCCTGGTGCTGTA
CTACGCGGCGCAGGGCGGTCGCGCCAAGCCCGCCGGCGAGCGCAAGATCGTGCGGCTGCGCACCGATACGCTGCGCGCGG
CGTTTCGCCAGGCGATCGAGCTGATCGAGGGGAATCTCGTTTCGCGCGCAGAGCGCTACAACATTCCCTGGATCATGGTG
CTCAACGAGGGCGACGATGCCCGGCCGTTGCCGATCGCCCAGTCGGGCGTGTCCAGCGCGCTTGGTACCGACGCCGCCAA
TGCGGCCGCCACCCAGGGCATCTCGTGGCACTTCTTCGACCGTGGCGTGGTGATCGACATCAACGCCGGCTACCTCGGTT
CGCCCGACGATGATGGCGATGAAAAGCCCTGGGACGAGTTCCTGGGGCTGTGCCGCAACTACCGTCCGCAGCGCCCCTTC
GACAGCGTGGTGATAACGGTGCCGGCGGCGAAGCTGCTGGCGGACGACACCGACGCGCAGCTCGAACTGGTGCGGCGCGC
CAAGCTCGTGCACCGGCGTCTGTGGCTCGCGCAGAACCGCTTCGCGGTGCGCTTTGCCGTATACGTGGTGGTGACCGGCG
CCGAAGCGCTGCCGGGGTTCGCCCAGTTCGCGCGGGACCTGCCCGAGCCGATGCGAGCCAGCATGCTGGGCTGGTCCTCG
CCCTACGACCTGTCCGCCACCTACCAGTCGGACTGGGTCGAGGCTGCCTTGTCGTCGATTGTGCGCAGCGTGTCCGACAG
CGCCGCCGAGTTGCTGGCGGCGGCGCCGCCCGACCTCGACGCGCGCCAGTTGCTGCTGCTGCCAGCCCGCATCGAGGCGA
TGCGCGCGCAGCTGCAGCGCTATATCGACGAGCTGCTGCGCCCGAGCGCCTATCACGAGCCGTTCTTCTTTCGAGGCGTC
TACCTGACCGGCGACAGCGGCGAGCTGGCGGCGCAGGGCCTGAGCGCGGTGCCGCGCGGTGAGACGGAGCCGGAACGCGA
AGACAGCGAGAGCCTGCCGGAGCGCATTGAGCCGGTGCTGGACGCCGGCGAAAGCAGTGTCGCTGGTGGCACGCATTTGA
CCGAGCTGATGCTGCAGCCGGCCTTCCTGCGCGACCTGTTCGACAAGAAGATATTCCTGGAATACGGCCTGACCCGGCCT
TCGCGCTCGCAGCATCTGGCCCGCCCGGTGGTGCACCGCGCGCTGCGCTGGGGCGGCGTGGCGCTGTTGGGGTTGTGGGG
TGTCGGTCTGGCGGTGAACACCTGGCAGCTCGGGCAACGCAAGGCGGAGCTGCTGGCAGCGCTGGGTGGGCTGCGCAATG
CCAGCCAGCAGCGTGCGCAGGCGGAGCAAGCCGGCCAGGAGCTGCCGCCCGAGTGGTACCGGCGCCAGACGCTCGGCCTG
ATCGATATGAACCAGCGCCTGATGGCGCAGTCGACCTGGTCCGTGTTCATGCCGGGTTCCTGGAGCCCGTTCGACGATCT
GGACGAGCGCATGCGCGAGCATTTCCAGCGCGAATTCGGCAAGGTGGCACTCCCCACGATCCACCGCGAGATGCTGGCGC
GCGTCAGCCAGCTCACCGGTGTCGTGCGCGACCCCAGCACCGCCGAGCTGGTGATCGGCGACGACTGCGCGGTGCCCGCC
GGTGCGCGTGGTGACGCGGGCGGTCCGCGCACCCTCGCGATCGAAGACCTGCCCGAGATGCGCGCGCTGCAGCAGTACGT
GGGGGCGGTCGACCAGTTCGACGCCGCTCTGTCAGCGCTGCAGCGCCTGGAAAACGGCGGGGAAGGGCGCAGCGAGGCGC
TGCGCACGGTGGTGCGCTATGCGCTGGGCGCGGAACTGCATGGGGATGTCTCCGGCACCTTGTCGTATTTCCGCACCGAC
GGCGGCGCCGGGCGCGGCGCACACGCCATGGTCGGCAGCGCACCGGCTGTAGGCCCGGCGCAAGTGGTGCAGCCGCTGCG
CTGCAGCTACGACAAGGGCGCGCGCCAACTGGAGGCGCGCCTGTTCAGCGACAACGCCCTGCTGGTGGCGGAGCGATCGG
TTCGGGACGGCCTGGAGGCGCTGAGCGGCGCCGGCACGGACTTCAGCCATGTGCTGGGCGACTATCGCGGGATCGTGGCG
GGCATTGGTACGCAACAGGAGTTGCTTGCGGGCGGCAAGGCCGGCTGGCTCCGGCAGCCGCAGTTCGCGCCCGGCCCGGC
CTACGAGCGCCTGCTGGCGCAGGCCACGCGCAGTCGCCTGCTGGGCGAGGATCTGGTGGCGCGCCAGCGCGAGCGTTCGC
GGGCCGGCTTCGCCGCGCTGCGCGAGGAACTGGCGCAACGCTTCAGCGGTCCCGAAGCGGGCATCGTCTGGCAGGACAAG
GAGGGCCGCTACGCGGTGGCGCCCGAACGGCTGGCGCTGCGCGACCGCCTGGCCGCGCTGGTCAGCCAGCCCTTCATGAC
TGCGCCGCGTGACCTGCCGCTGCCCGCGCTCGGTGCGCGCACGGTGGTGAACTGGGACCGCCAGCAGCTCGACCAGGCCA
TGACCCTGGCCGAGACCCGCAAGCGTTTCGTGGGCGAGGGCCTGGCCGACCTGCCGGGCGCCTCGCGCGATACGGTGGCG
CGCAGCATCGACGCGCAGTTCACGCGGCTGATGATGGACCAGGTGGCGGCAGCCGCGGTGGTCGCGCCGGCCGGCGCCGC
GGGCAGCGCAGGCAGCACGGGCAGCGACAGCGCCGCGTTCGAGGCCGCGCTGGGCCGGTTGGTGAAGATCAAGACCGCCC
TGGCCGAGATGCACGCCACGGCGCGCGTGGAAGATCTCGATGCGCTCATCTCGCGCGATGCGCTGGCGCATCTGCGCGCG
GTTGACGAGGCCCTGCAACAGTCCGAACTCTATGCCATCCGCCAGTCCGGCGGCGATGCCCGCAGCAGGTCGCCGATGCT
GGCGGCGTTCGGCCTGAGCGATGCGGCCGGGCTCGGCCCCTACCTGGACCAGCAGTCGGGACGCGCGCTGGCGTTGGGGC
GCGAGGCCTCGCTTTACCTGGGCGTGCTCAATTCGGGCGATGCCGCCTCGCCGCTGGCGCAGCGCTGGCTGGCCATCACG
CGCGACCTCGAACGCTACCGGCTGAAGAACCCGAACAGCCAGCTGCTGATGCTCGAGCAGTTCATCCAGGGAATGGCCGC
CGATGGTGGCCGCGGGGGCTGCTTTGGCCGCTTCGCCAGCCGCCTGCCGCGCGGTGCCGACGACTACTTCGCCACGCTCC
AGGCACGTGTCTACGAGGGCTTGCTGGCGCGTTGCGCGCAGGGGTACTTCGCCGAACTGCAGCGCCAGTGGGACGGCTTC
TCCGCGATCTTCAATGAACGCGTGGCAGGGCATGCGCCCTTTGGCGCGGCCGTGCAGGGCGGGCCCAACCCGGCCGATCA
GACCATGGCCGACTACGGCGAACTCGGTCGCGTGCTCAAGCGCTACGAGCAGGTCTCGACGGTCTATCGCGAGCCACGCG
GCGACGGCCCGCTCAAGGGCCTGTCCGCTGGCATGCCGGTGCACCAGTTCATGGACAACTTCGAGCAAGTCCGGACACTG
CTTTCCCCGCTGTATCCGGCGGATGACAGCACACCCGGCGGCTACGACATCAACGTCGACTTCCGTGTCAATCGGAGTGC
CGAACTGGCCGGCAACCAGATCATCGACTGGAGCCTGAGCGTGGGCGCGCAGAACCTGTCTCAGCAGGAGGCTCCGCGCT
CGCTGCGCTGGGAGTACGGCATGCCGGTGATGCTGACACTGCGCTTCGCCAAGGATTCGCCGCTGCAGGCCACGGCGGAC
CCGCGCCAGCGCGCGTTGTCTACCGACGGCAGGTCGATGACCTGGCGCTTTGCCGATCCCTGGGCGCTCATTTCCTTTAT
CGGCCGCCAGCGGGTGGCGGATCCTTCGGTGCGCGCCGAGGGTGCCGCCTCGCTGCTGCGCTTCGATTTCCCGCTGGCGC
CGGCCACCCCGGCAGATTTGACTGCCGTGCCGAAGCAGGGGCAGGGCCGCGTGTTCCTGCGCCTGGCGCTGACCCCCGCC
GGCAAGAAGACGCCGCTGCCGTGGCCGCGCAGCTTCCCGACCCGTGCTCCCGACTGGAACCCGCTGTGA