Detailed information of component protein


Summary

Component ID T6CP210292
Component protein type TssL
T6SS ID (Type) T6SS14098 experimental (Type i2)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (231 a.a.); Nucleotide sequence (693 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS21085
Coordinate (Strand) 4308469..4309161 (+)
NCBI ID WP_013096431.1
RefSeq NZ_CP056776
Uniprot ID A0A0M7BW79_ENTCL, A0A0H3CJM2_ENTCC
KEGG ID enc:ECL_01804
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
DotU PF09850.11 6.7e-31 14..215
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Inside 1-190 MSERKRGTAAAIDIDALLQDTWLQVISLRHGPTFQEGEGRTLWERCIADVERVQRELKASELDEASCQHILTAQCALLDEAVKGRGVEDDACVQWYDIPLQGHFLGTMDAGDTLCDRMRDVLREPAPDHAVVTCFQRVMMLGFLGSYRSLNDPERQKLVNALSEYVTPFSYPQSYPVLAESHTGRGIMGG
Transmembrane helix 191-213 WLASWPVRIGLSVIVVAALWWGL
Outside 214-230 DRWLDQLLLTLLPGAVK


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9951 - -


  Protein sequence: 231 a.a.    

>T6CP210292 NZ_CP056776:4308469-4309161 [Enterobacter cloacae] [TssL]
MSERKRGTAAAIDIDALLQDTWLQVISLRHGPTFQEGEGRTLWERCIADVERVQRELKASELDEASCQHILTAQCALLDE
AVKGRGVEDDACVQWYDIPLQGHFLGTMDAGDTLCDRMRDVLREPAPDHAVVTCFQRVMMLGFLGSYRSLNDPERQKLVN
ALSEYVTPFSYPQSYPVLAESHTGRGIMGGWLASWPVRIGLSVIVVAALWWGLDRWLDQLLLTLLPGAVK*

  Nucleotide sequence: 693 bp    

>T6CP210292 NZ_CP056776:4308469-4309161 [Enterobacter cloacae] [TssL]
ATGAGTGAGCGTAAACGCGGCACTGCCGCGGCCATTGATATTGATGCCCTGCTGCAGGACACCTGGCTTCAGGTGATCAG
CCTGCGTCACGGTCCGACGTTTCAGGAGGGCGAAGGGCGCACGCTGTGGGAGCGCTGTATTGCTGATGTCGAACGTGTGC
AGCGTGAGCTGAAAGCGAGCGAACTCGATGAAGCCAGCTGTCAGCATATTCTTACCGCACAGTGCGCCCTGCTCGATGAG
GCGGTGAAAGGTCGTGGTGTGGAAGATGACGCCTGTGTGCAGTGGTATGACATTCCCCTGCAGGGGCACTTCCTCGGCAC
TATGGACGCCGGCGACACGCTGTGCGATCGGATGCGCGATGTGCTGCGTGAACCGGCGCCTGACCACGCTGTCGTGACCT
GCTTCCAGCGGGTCATGATGCTGGGTTTTCTCGGCAGTTACCGATCATTGAATGACCCGGAGCGCCAGAAACTTGTCAAC
GCACTCAGTGAATATGTCACACCGTTCAGCTATCCACAGTCCTACCCCGTACTGGCGGAAAGTCATACCGGGCGGGGAAT
CATGGGCGGCTGGCTGGCGTCATGGCCCGTACGTATTGGTCTGAGCGTGATAGTGGTCGCTGCACTCTGGTGGGGACTGG
ATCGCTGGCTGGATCAGTTGCTGCTAACCCTGTTGCCGGGGGCCGTGAAATGA