Detailed information of component protein


Summary

Component ID T6CP210285
Component protein type TssI
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (641 a.a.); Nucleotide sequence (1923 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19855
Coordinate (Strand) 4072428..4074350 (+)
NCBI ID WP_020690884.1
RefSeq NZ_CP056776
Uniprot ID UPI00031A52EA
KEGG ID -
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Phage_GPD PF05954.13 2.6e-87 22..327
Phage_base_V PF04717.14 2.6e-15 381..448
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-640 MLNRITVQLPVEGLLFWKLSGREAMSESFALTLTLLGTDARIDRSKLLGQPVTVTIPTQNLLTPRYINGKVTRVAVSAVELTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVNVEDKLTGSYRVWDYCVQYQESSLDFISRLMELEGIAYYFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQAQQNPASPKPGSIDVYDWPGRFVETGHAEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGDYLVTAAGYHLEENRYASGEGETIHRIDFTVIPASVSFRPAQSTAWPRTYGPQTAKVVGPQGESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRTKDGSVDNANALRFEDKAGAEQVWIQAERNMDTSIKNDETHSVGGERSHYVKKNELHRVEANQIQAVKGGTEILTGKGKLDAAVEQYVLASGTKLRLVSGESAIELNANGKISLIGKEFNFFVEGDGHITTGGKLHLNTSGAKPGTTAPGAGHKGDIDAAVQAKFTTKGD


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9454 - -


  Protein sequence: 641 a.a.    

>T6CP210285 NZ_CP056776:4072428-4074350 [Enterobacter cloacae] [TssI]
MLNRITVQLPVEGLLFWKLSGREAMSESFALTLTLLGTDARIDRSKLLGQPVTVTIPTQNLLTPRYINGKVTRVAVSAVE
LTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVNVEDKLTGSYRVWDYCVQYQESSLDFISRLMEL
EGIAYYFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQ
AQQNPASPKPGSIDVYDWPGRFVETGHAEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGDYLVTAA
GYHLEENRYASGEGETIHRIDFTVIPASVSFRPAQSTAWPRTYGPQTAKVVGPQGESIWTDKYGRVKVKFHWDRLAKGDD
TSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRTKDGSVDNAN
ALRFEDKAGAEQVWIQAERNMDTSIKNDETHSVGGERSHYVKKNELHRVEANQIQAVKGGTEILTGKGKLDAAVEQYVLA
SGTKLRLVSGESAIELNANGKISLIGKEFNFFVEGDGHITTGGKLHLNTSGAKPGTTAPGAGHKGDIDAAVQAKFTTKGD
*

  Nucleotide sequence: 1923 bp    

>T6CP210285 NZ_CP056776:4072428-4074350 [Enterobacter cloacae] [TssI]
ATGCTCAACCGAATTACCGTTCAGCTCCCCGTCGAGGGGCTGCTTTTCTGGAAACTCTCCGGCCGCGAGGCGATGTCCGA
GTCGTTCGCCCTGACGCTGACCCTGCTCGGCACGGATGCGCGTATCGACCGCAGCAAACTGCTGGGCCAGCCGGTCACGG
TGACCATCCCCACCCAGAACCTGCTTACCCCGCGCTACATCAACGGTAAAGTCACGCGCGTGGCGGTGAGCGCCGTTGAG
CTGACGGGCACACGCTATGCGGTGTATCAGCTGACGGTGGAGCCGGACCTGTGGCCGATGAAGCGCGACCGTAACCTGCG
TATCTTCCAGGGGCAGACGGTGCCGCAGATTGTGAAAACCCTGCTGGGCGAGCATCAGGTCAACGTGGAAGATAAGCTCA
CCGGCAGCTACCGGGTGTGGGACTACTGTGTCCAGTATCAGGAGTCGAGCCTGGACTTCATCAGCCGCCTGATGGAGCTG
GAGGGGATAGCGTATTACTTCAGCCACGAGGCCGACAAACACACCCTGGTGCTCACCGATGCCGCCACGCAGCATCAGCC
GTTCAGCGGCTACGAGGTCATCCCCTATCACCAGACGCCGTCCGGCGGCAGCACGGACGAAGAGGGTATCAGCCAGTGGG
CGCTGGAGGACAGCGTGACGCCGGGCATTTACAGCCTCGACGACTACGACTTCCGCAAGCCGAACGCGTGGCTGTTCCAG
GCGCAGCAGAACCCGGCCTCGCCGAAGCCAGGCAGCATTGACGTGTACGACTGGCCGGGGCGCTTTGTGGAGACCGGGCA
TGCGGAGTTCTACGCCCGCATTCGTCAGGAGCGCTGGCAGGTGGAGCATCAGCAGATTCAGGCCACGGCCACGGCGGCGG
GTATTGCGCCGGGCCACACCTTCACCCTGACCAACGCACCGTTCTTCAGCGATAACGGTGACTATCTGGTGACGGCGGCC
GGGTATCATCTGGAAGAGAACCGCTACGCGAGCGGCGAAGGGGAGACCATCCACCGCATCGATTTCACGGTTATCCCGGC
GTCGGTGTCGTTCCGTCCGGCGCAGTCCACGGCGTGGCCGCGTACCTACGGCCCGCAGACGGCGAAGGTTGTCGGGCCGC
AGGGGGAGAGCATCTGGACGGACAAATATGGCCGCGTGAAGGTGAAATTCCACTGGGACCGTCTGGCAAAAGGGGACGAC
ACAAGCTCCTGCTGGGTGCGTGTGTCGAGCGCATGGGCAGGCCAGGGTTACGGCGGGGTGCAGATCCCGCGCGTGGGCGA
TGAGGTGGTGGTGGACTTTATCAACGGTGACCCGGACCGTCCGATTATTACCGGGCGCGTGTACAACGATGCCAGCATGC
CACCGTGGGCGCTGCCGGCAGCGGCGACGCAGATGGGCTTTATGAGCCGCACGAAAGACGGTTCCGTGGATAACGCCAAC
GCCCTGCGGTTTGAGGACAAGGCGGGTGCGGAGCAGGTGTGGATCCAGGCCGAGCGAAATATGGATACCAGCATCAAGAA
TGACGAAACGCACAGCGTCGGCGGCGAGCGTAGCCATTACGTAAAGAAAAACGAACTGCATCGCGTGGAAGCGAATCAGA
TCCAGGCGGTAAAAGGCGGAACCGAGATCCTGACCGGCAAAGGAAAGCTGGATGCGGCGGTGGAGCAGTATGTCCTTGCC
TCCGGCACCAAACTGCGGCTGGTGTCAGGTGAAAGTGCGATTGAACTTAACGCTAACGGCAAAATTAGCCTGATCGGTAA
AGAGTTTAACTTCTTCGTTGAAGGGGATGGTCACATCACCACGGGCGGTAAGCTGCATCTCAATACGTCAGGCGCTAAGC
CAGGCACAACGGCGCCGGGCGCGGGGCACAAAGGAGACATTGATGCGGCGGTTCAGGCGAAATTCACGACCAAGGGTGAT
TAA