Detailed information of component protein


Summary

Component ID T6CP210284
Component protein type TssI
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (643 a.a.); Nucleotide sequence (1929 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19830
Coordinate (Strand) 4067462..4069390 (+)
NCBI ID WP_013096197.1
RefSeq NZ_CP056776
Uniprot ID A0A0H3CIZ3_ENTCC
KEGG ID enc:ECL_01558
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Phage_GPD PF05954.13 2.7e-87 22..327
Phage_base_V PF04717.14 2.6e-15 381..448
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-642 MLNRITVQLPVEGLLFWKLSGREAMSESFALTLTLLGTDARIDRSKLLGQPVTVTIPTQNLLTPRYINGKVTRVAVSAVELTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVNVEDKLTGSYRVWDYCVQYQESSLDFISRLMELEGIAYYFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQAQQNPASPKPGSIDVYDWPGRFVETGHAEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGDYLVTAAGYHLEENRYASGEGETIHRIDFTVIPASVSFRPAQSTAWPRTYGPQTAKVVGPQGESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRTKDGSVDNANALRFEDKAGAEQVWLQAERNLDINVKNDESHATEKNRTQYVGEDETLRVAKNQKAGVKGDVVCLTGNSRSDKVVNDFIISAGNTLRLECGESAIELSKDGSVNIIGNNFNFTAKQSAQINTLSGELHLNPADGSNAIDAPGASHQTAIQQEVDGFFVFNANK


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9454 - -


  Protein sequence: 643 a.a.    

>T6CP210284 NZ_CP056776:4067462-4069390 [Enterobacter cloacae] [TssI]
MLNRITVQLPVEGLLFWKLSGREAMSESFALTLTLLGTDARIDRSKLLGQPVTVTIPTQNLLTPRYINGKVTRVAVSAVE
LTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVNVEDKLTGSYRVWDYCVQYQESSLDFISRLMEL
EGIAYYFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQ
AQQNPASPKPGSIDVYDWPGRFVETGHAEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGDYLVTAA
GYHLEENRYASGEGETIHRIDFTVIPASVSFRPAQSTAWPRTYGPQTAKVVGPQGESIWTDKYGRVKVKFHWDRLAKGDD
TSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRTKDGSVDNAN
ALRFEDKAGAEQVWLQAERNLDINVKNDESHATEKNRTQYVGEDETLRVAKNQKAGVKGDVVCLTGNSRSDKVVNDFIIS
AGNTLRLECGESAIELSKDGSVNIIGNNFNFTAKQSAQINTLSGELHLNPADGSNAIDAPGASHQTAIQQEVDGFFVFNA
NK*

  Nucleotide sequence: 1929 bp    

>T6CP210284 NZ_CP056776:4067462-4069390 [Enterobacter cloacae] [TssI]
ATGCTCAACCGAATTACCGTTCAGCTCCCCGTCGAGGGGCTGCTTTTCTGGAAACTCTCCGGCCGCGAGGCGATGTCCGA
GTCGTTCGCCCTGACGCTGACCCTGCTCGGCACGGATGCGCGTATCGACCGCAGCAAACTGCTGGGCCAGCCGGTCACGG
TGACCATCCCCACCCAGAACCTGCTTACCCCGCGCTACATCAACGGTAAAGTCACGCGCGTGGCGGTGAGCGCCGTTGAG
CTGACGGGCACACGCTATGCGGTGTATCAGCTGACGGTGGAGCCGGACCTGTGGCCGATGAAGCGCGACCGTAACCTGCG
TATCTTCCAGGGGCAGACGGTGCCGCAGATTGTGAAAACCCTGCTGGGCGAGCATCAGGTCAACGTGGAAGATAAGCTCA
CCGGCAGCTACCGGGTGTGGGACTACTGTGTCCAGTATCAGGAGTCGAGCCTGGACTTCATCAGCCGCCTGATGGAGCTG
GAGGGGATAGCGTATTACTTCAGCCACGAGGCCGACAAACACACCCTGGTGCTCACCGATGCCGCCACGCAGCATCAGCC
GTTCAGCGGCTACGAGGTCATCCCCTATCACCAGACGCCGTCCGGCGGCAGCACGGACGAAGAGGGTATCAGCCAGTGGG
CGCTGGAGGACAGCGTGACGCCGGGCATTTACAGCCTCGACGACTACGACTTCCGCAAGCCGAACGCGTGGCTGTTCCAG
GCGCAGCAGAACCCGGCCTCGCCGAAGCCAGGCAGCATTGACGTGTACGACTGGCCGGGGCGCTTTGTGGAGACCGGGCA
TGCGGAGTTCTACGCCCGCATTCGTCAGGAGCGCTGGCAGGTGGAGCATCAGCAGATTCAGGCCACGGCCACGGCGGCGG
GTATTGCGCCGGGCCACACCTTCACCCTGACCAACGCACCGTTCTTCAGCGATAACGGTGACTATCTGGTGACGGCGGCC
GGGTATCATCTGGAAGAGAACCGCTATGCCAGCGGCGAAGGGGAGACCATCCACCGCATCGATTTCACGGTTATCCCGGC
GTCGGTGTCGTTCCGTCCGGCGCAGTCCACGGCGTGGCCGCGTACCTACGGCCCGCAGACGGCGAAGGTTGTCGGGCCCC
AGGGAGAGAGCATCTGGACGGACAAATATGGCCGCGTGAAGGTGAAATTCCACTGGGACCGTCTGGCAAAAGGGGACGAC
ACCAGCTCCTGCTGGGTGCGCGTGTCGAGCGCCTGGGCGGGCCAGGGCTACGGTGGGGTGCAGATCCCGCGCGTGGGCGA
TGAGGTGGTGGTGGACTTTATCAACGGTGACCCGGACCGTCCTATTATCACCGGGCGCGTGTACAACGATGCCAGCATGC
CACCGTGGGCGCTGCCGGCGGCGGCGACGCAGATGGGCTTTATGAGCCGCACGAAAGATGGCTCCGTGGATAACGCCAAC
GCCCTGCGGTTTGAGGACAAGGCGGGTGCGGAACAGGTGTGGCTCCAGGCCGAGCGCAATCTCGATATCAACGTCAAAAA
TGATGAATCGCATGCCACGGAAAAAAATCGAACCCAATATGTGGGAGAGGATGAAACCTTACGGGTGGCAAAAAATCAGA
AGGCAGGGGTTAAAGGGGATGTGGTCTGCCTGACGGGCAACAGCCGCAGCGATAAAGTTGTTAATGACTTTATTATTTCA
GCGGGCAATACGTTGAGGCTGGAGTGTGGTGAAAGCGCTATCGAATTATCAAAAGACGGGAGCGTGAATATCATTGGCAA
TAACTTTAACTTTACCGCAAAACAGAGTGCGCAAATAAACACGCTTTCCGGGGAATTGCATCTTAACCCTGCTGATGGCA
GCAATGCCATCGATGCGCCAGGGGCATCTCACCAGACAGCAATCCAGCAGGAAGTGGATGGTTTTTTTGTTTTCAATGCT
AATAAGTAA