Detailed information of component protein


Summary

Component ID T6CP210280
Component protein type TssG
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (348 a.a.); Nucleotide sequence (1044 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19785
Coordinate (Strand) 4056671..4057714 (+)
NCBI ID WP_013096190.1
RefSeq NZ_CP056776
Uniprot ID A0A5E1ACR9_9ENTR, A0A4Q8WP93_ENTCL, A0A0H3CGV2_ENTCC
KEGG ID enc:ECL_01550
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
T6SS_TssG PF06996.13 1.3e-101 29..330
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-347 MSDVVTAPLKVHRLTPLPDSFWRGVRETPWRYDLFQLLRRIDAQGGERYPLGRAPLPKFEPLRLGQQPSMSFAPSTVAQVRQREGNGLHEVSILSFGLFGPNGPLPVHMTEYARERIHHHQDTSLSAFADLFHHRLTLLFYRAWADAQPAVSLDRADNKRFEGYLASLIGMGQPGQMDKGSLSAHARFTHAGHLTRHGRDPEGLEKILRNYFKAPVKLIANVPQWMPLSPREQAQLGAGRRVPRMGESAFLGVAVRDVQHKFRIEIGPLSAEEYNRFLPGEAWVTELRDWVRQYAGVEFEWETRVILRADAVQGATLGSTGRLGYNTWLGLQPQPVPRGDLVYRAER


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9969 - -


  Protein sequence: 348 a.a.    

>T6CP210280 NZ_CP056776:4056671-4057714 [Enterobacter cloacae] [TssG]
MSDVVTAPLKVHRLTPLPDSFWRGVRETPWRYDLFQLLRRIDAQGGERYPLGRAPLPKFEPLRLGQQPSMSFAPSTVAQV
RQREGNGLHEVSILSFGLFGPNGPLPVHMTEYARERIHHHQDTSLSAFADLFHHRLTLLFYRAWADAQPAVSLDRADNKR
FEGYLASLIGMGQPGQMDKGSLSAHARFTHAGHLTRHGRDPEGLEKILRNYFKAPVKLIANVPQWMPLSPREQAQLGAGR
RVPRMGESAFLGVAVRDVQHKFRIEIGPLSAEEYNRFLPGEAWVTELRDWVRQYAGVEFEWETRVILRADAVQGATLGST
GRLGYNTWLGLQPQPVPRGDLVYRAER*

  Nucleotide sequence: 1044 bp    

>T6CP210280 NZ_CP056776:4056671-4057714 [Enterobacter cloacae] [TssG]
ATGAGCGACGTTGTCACTGCGCCACTGAAGGTCCATCGTCTGACGCCGCTGCCGGACAGTTTCTGGCGCGGGGTTCGCGA
GACGCCATGGCGCTACGATCTGTTCCAGCTGTTAAGGCGCATTGATGCTCAGGGCGGGGAACGCTACCCGCTGGGGCGTG
CGCCGCTGCCAAAATTCGAGCCGCTACGCCTGGGCCAGCAGCCGTCGATGAGTTTTGCACCTTCGACGGTGGCGCAGGTA
CGCCAGCGCGAAGGCAACGGGCTGCACGAGGTCTCCATTCTGAGCTTCGGCCTGTTTGGTCCTAACGGGCCGCTGCCGGT
TCACATGACCGAGTACGCCCGCGAGCGGATCCATCATCATCAGGACACCAGCCTGAGCGCGTTTGCCGATCTGTTCCATC
ATCGTCTGACGCTGCTGTTTTATCGCGCCTGGGCCGATGCGCAGCCTGCCGTCTCCCTCGACCGCGCCGACAATAAACGT
TTTGAGGGATATCTGGCGTCGTTGATTGGTATGGGGCAGCCCGGCCAGATGGACAAAGGCAGCCTGAGCGCCCATGCCCG
CTTTACCCACGCCGGACACCTGACCCGCCACGGACGGGATCCTGAAGGTCTGGAAAAAATCCTGCGTAACTATTTTAAAG
CCCCGGTCAAACTGATCGCCAACGTACCGCAGTGGATGCCGCTTTCACCGCGCGAGCAGGCGCAGCTGGGAGCAGGACGC
CGCGTGCCGCGGATGGGCGAATCTGCGTTTCTGGGCGTGGCGGTCCGCGATGTGCAGCATAAATTTCGCATCGAGATTGG
CCCACTCAGCGCGGAAGAGTACAACCGGTTTTTGCCCGGTGAAGCATGGGTAACCGAACTGCGGGACTGGGTACGCCAGT
ACGCAGGGGTGGAATTTGAATGGGAAACACGGGTGATCCTGCGCGCTGACGCCGTGCAGGGCGCCACGCTCGGCAGCACC
GGGCGATTGGGGTACAACACCTGGCTGGGCCTTCAGCCGCAGCCTGTCCCGCGTGGCGATCTGGTGTATCGCGCAGAGCG
GTAA