Detailed information of component protein


Summary

Component ID T6CP210271
Component protein type TssA
T6SS ID (Type) T6SS14097 experimental (Type i3)
Strain Enterobacter cloacae strain DSM 30054
Replicon chromosome
Sequence Protein sequence (339 a.a.); Nucleotide sequence (1017 bp)
Reference
experimental Experimental investigation has been performed on this T6SS
External database links

Locus tag (Gene) HWQ16_RS19725
Coordinate (Strand) 4044931..4045947 (+)
NCBI ID WP_013096180.1
RefSeq NZ_CP056776
Uniprot ID A0A0H3CIX3_ENTCC
KEGG ID enc:ECL_01538
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
ImpA_N PF06812.14 4.3e-36 7..130
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-338 MNIEEFLAPISPEKPCGDNLEYDADFQAMGQASQGKAEQQFGDTIIPAEPADWNTVEKLATSLLGRTKDLRVMLALTHAWTRRRGLPGYADGLLLVQEAITRYWEPLYPLLEEYGETDPFYRINALAALSDKSDLTVALRNASLLRSNGDEISLRDAQALLDGSKTECPDYPGGRPRLIDELARGDQPGTEAVILINERLLAIRDLLSGYLGESGVPEMEQLLKTVGLVASACQVTDISKLLPNRDAQAEHHAEPQTVATQPVQQVTDWRSVQVTSRADAQLMLEKAKQYFAQYEPSHPAPLMIERVQRLSELNFMDIIRDLAPDGVNQLENIFGRRE


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9829 - -


  Protein sequence: 339 a.a.    

>T6CP210271 NZ_CP056776:4044931-4045947 [Enterobacter cloacae] [TssA]
MNIEEFLAPISPEKPCGDNLEYDADFQAMGQASQGKAEQQFGDTIIPAEPADWNTVEKLATSLLGRTKDLRVMLALTHAW
TRRRGLPGYADGLLLVQEAITRYWEPLYPLLEEYGETDPFYRINALAALSDKSDLTVALRNASLLRSNGDEISLRDAQAL
LDGSKTECPDYPGGRPRLIDELARGDQPGTEAVILINERLLAIRDLLSGYLGESGVPEMEQLLKTVGLVASACQVTDISK
LLPNRDAQAEHHAEPQTVATQPVQQVTDWRSVQVTSRADAQLMLEKAKQYFAQYEPSHPAPLMIERVQRLSELNFMDIIR
DLAPDGVNQLENIFGRRE*

  Nucleotide sequence: 1017 bp    

>T6CP210271 NZ_CP056776:4044931-4045947 [Enterobacter cloacae] [TssA]
ATGAATATCGAAGAATTTCTCGCGCCGATAAGCCCCGAAAAACCCTGCGGCGACAACCTTGAGTACGACGCCGATTTTCA
GGCTATGGGACAGGCAAGCCAGGGTAAAGCGGAACAGCAGTTCGGCGACACGATCATTCCCGCCGAGCCCGCTGACTGGA
ATACGGTAGAAAAGCTCGCCACCAGCCTGCTGGGGCGCACCAAAGATCTTCGCGTCATGCTGGCGTTAACCCATGCCTGG
ACCCGACGTCGTGGGCTGCCGGGCTACGCGGACGGCCTGCTGCTCGTGCAGGAGGCGATCACCCGCTACTGGGAGCCGCT
CTATCCACTGCTGGAGGAGTATGGCGAAACGGACCCGTTCTATCGCATTAACGCCCTTGCCGCGCTGAGCGATAAATCTG
ACCTGACCGTCGCGCTGCGAAACGCCTCGCTGCTGCGCTCAAACGGCGATGAAATTTCGCTGCGTGACGCGCAGGCATTG
CTGGATGGCAGCAAAACCGAATGCCCGGATTATCCCGGCGGCCGCCCAAGACTGATTGACGAACTGGCGCGCGGCGACCA
GCCAGGTACAGAGGCCGTCATCCTGATTAATGAAAGGCTGCTGGCCATTCGCGATCTGCTTAGCGGTTACCTTGGTGAAA
GCGGCGTACCGGAAATGGAGCAGTTGCTGAAAACCGTGGGCCTGGTCGCCAGCGCCTGTCAGGTGACCGACATCAGCAAA
CTGCTGCCCAATCGGGATGCACAGGCGGAACACCACGCTGAGCCGCAGACGGTGGCCACCCAACCCGTGCAGCAGGTCAC
CGACTGGCGCAGCGTGCAGGTTACCAGTCGCGCCGACGCCCAGCTGATGCTGGAGAAAGCGAAACAGTATTTTGCGCAGT
ACGAACCGAGCCACCCCGCACCGCTGATGATTGAACGGGTGCAGCGGCTGTCAGAACTTAACTTCATGGACATTATTCGC
GACCTGGCGCCAGACGGCGTTAACCAACTGGAAAATATCTTTGGACGCCGCGAATGA